RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 TCTE3Q8IZS6 198 aa11.47□□□□□ -0.57
ERGIC3-216ENST00000488384 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
ERGIC3-216ENST00000488384 VGLL1Q99990 258 aa11.47□□□□□ -0.57
ERGIC3-216ENST00000488384 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
ERGIC3-216ENST00000488384 OTORQ9NRC9 128 aa11.47□□□□□ -0.57
ERGIC3-216ENST00000488384 A0A0D9SG52 128 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 J3KRW8 73 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 BCL2L11O43521 198 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 GCHFRP30047 84 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 Q6ZTC4 211 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 SUN5Q8TC36 379 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 C20orf144Q9BQM9 153 aa11.46□□□□□ -0.57
ERGIC3-216ENST00000488384 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 KLLNB2CW77 178 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 CSN1S1P47710 185 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 AKR1C8PQ5T2L2 129 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 TMEM78Q5T7P6 136 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 ZNF767PQ75MW2 155 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 Q8TAT8 98 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 LINC01587Q99440 93 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 YTHDF2Q9Y5A9 579 aaKnown RBP11.45□□□□□ -0.58
ERGIC3-216ENST00000488384 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 PLAC8L1A1L4L8 177 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 RBAKDNA6NC62 111 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 PGPA6NDG6 321 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 DIRC3C9JPN6 131 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 CXorf1O96002 111 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 CRISP2P16562 243 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 AZU1P20160 251 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 TAS2R60P59551 318 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 ZNF492Q9P255 531 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 BIRC6Q9NR09 4857 aa11.44□□□□□ -0.58
ERGIC3-216ENST00000488384 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 H7BYZ3 331 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 SLC25A5P05141 298 aaKnown RBP11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 ZNF138P52744 262 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 PRR9Q5T870 116 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 RXFP4Q8TDU9 374 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 ZNF471Q9BX82 626 aaPredicted RBP11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
ERGIC3-216ENST00000488384 C7orf71A4D174 169 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 NMBP08949 121 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 CD300CQ08708 224 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 RPH3ALQ9UNE2 315 aa11.42□□□□□ -0.58
ERGIC3-216ENST00000488384 VPS13DQ5THJ4 4388 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 TRBV7-9A0A0J9YWB2 115 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 GGTLC3B5MD39 225 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 PFDN1O60925 122 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 C1QBP02746 253 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 HTN1P15515 57 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 GNG5P63218 68 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 ARL6IP6Q8N6S5 226 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 C16orf74Q96GX8 76 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
ERGIC3-216ENST00000488384 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 SEC11BP0C7V7 166 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 FHITP49789 147 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 FGF8P55075 233 aaPredicted RBP11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 LGALSLQ3ZCW2 172 aaPredicted RBP11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 AKAP14Q86UN6 197 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 TMPRSS5Q9H3S3 457 aa11.4□□□□□ -0.58
ERGIC3-216ENST00000488384 ZNF324O75467 553 aaPredicted RBP11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 GPX1P07203 203 aa11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 STOML3Q8TAV4 291 aa11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 C2CD4CQ8TF44 421 aa11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 TMED6Q8WW62 240 aa11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 PYGO2Q9BRQ0 406 aa11.39□□□□□ -0.59
ERGIC3-216ENST00000488384 TRAV8-1A0A0A6YYK1 113 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 TCRAP04437 139 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 TPT1P13693 172 aaKnown RBP11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 EIF5AP63241 154 aaKnown RBP11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 Q6ZQT7 251 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
ERGIC3-216ENST00000488384 LENEPQ9Y5L5 61 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms