RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
UBE4B-210ENST00000488228 X6R8D5 127 aa8.02□□□□□ -1.13
UBE4B-210ENST00000488228 A0A0J9YWU9 116 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 FAM74A7A6NL05 159 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 DEFB4AO15263 64 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 GFI1BQ5VTD9 330 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 GOLT1AQ6ZVE7 132 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 C1orf158Q8N1D5 194 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 C5orf17Q8NAS9 161 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 IGF2BP2-AS1Q96M15 143 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 EDA2RQ9HAV5 297 aa8.01□□□□□ -1.13
UBE4B-210ENST00000488228 TRAV8-1A0A0A6YYK1 113 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 IGHV4-28A0A0C4DH34 117 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 A0A1W2PRE2 83 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 ZNF705EA8MWA4 302 aaPredicted RBP8□□□□□ -1.13
UBE4B-210ENST00000488228 AMBPP02760 352 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 TCRAP04437 139 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 LEPP41159 167 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 CDKN1BP46527 198 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 RAB5CP51148 216 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
UBE4B-210ENST00000488228 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 PRR9Q5T870 116 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
UBE4B-210ENST00000488228 Q8NAQ8 132 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 RXFP4Q8TDU9 374 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 ODF3Q96PU9 254 aa8□□□□□ -1.13
UBE4B-210ENST00000488228 RBAKDNA6NC62 111 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 TSPOP30536 169 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 ATP5G3P48201 142 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 BTN1A1Q13410 526 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 FAM19A4Q96LR4 140 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 SGK494Q96LW2 274 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 WWC2-AS2Q96NR7 200 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 TMEM208Q9BTX3 173 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 ZNF492Q9P255 531 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 GOLT1BQ9Y3E0 138 aa7.99□□□□□ -1.13
UBE4B-210ENST00000488228 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 TRAV12-3A0A0B4J271 114 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 PAGE4O60829 102 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 IFNA7P01567 189 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 PRM2P04554 102 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 ZNF138P52744 262 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 CCL20P78556 96 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 CST9LP1Q5W188 147 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 ZFAND2AQ8N6M9 145 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 CYB561D1Q8N8Q1 229 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 C11orf68Q9H3H3 251 aaKnown RBP7.98□□□□□ -1.13
UBE4B-210ENST00000488228 EPDR1Q9UM22 224 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
UBE4B-210ENST00000488228 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 C7orf71A4D174 169 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 KLLNB2CW77 178 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 F6UZH7 168 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 PEX7O00628 323 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 MIFP14174 115 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 CRISP2P16562 243 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 ATG101Q9BSB4 218 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 GNG13Q9P2W3 67 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 ARL2-SNX15V9GYD0 113 aa7.97□□□□□ -1.13
UBE4B-210ENST00000488228 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 ZNF705GA8MUZ8 300 aaPredicted RBP7.96□□□□□ -1.14
UBE4B-210ENST00000488228 IGLV2-11P01706 119 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 HBE1P02100 147 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 GPX1P07203 203 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.14
UBE4B-210ENST00000488228 EMP1P54849 157 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 Q6ZQT7 251 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 Q86TA4 180 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 ARL6IP6Q8N6S5 226 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 TVP23CQ96ET8 276 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 LINC00479Q96M42 142 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 CELA1Q9UNI1 258 aa7.96□□□□□ -1.14
UBE4B-210ENST00000488228 LOC102723971A0A1B0GUV8 181 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 SERTM2A0A1B0GWG4 89 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 SCO2A0A1W2PP80 73 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 K7EQM0 130 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 HTN1P15515 57 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 FLI1Q01543 452 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-210ENST00000488228 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 PRNTQ86SH4 94 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 TMEM256Q8N2U0 113 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 LINC01587Q99440 93 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 NEU1Q99519 415 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 NIPSNAP3BQ9BS92 247 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 NKX6-2Q9C056 277 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-210ENST00000488228 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
UBE4B-210ENST00000488228 DYNC2H1Q8NCM8 4307 aaKnown RBP7.95□□□□□ -1.14
UBE4B-210ENST00000488228 TENM2Q9NT68 2774 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 TRBV7-9A0A0J9YWB2 115 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 TEX46H3BTG2 121 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 H7BYZ3 331 aa7.94□□□□□ -1.14
UBE4B-210ENST00000488228 AZU1P20160 251 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms