RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 OR10G4Q8NGN3 311 aa8.71□□□□□ -1.02
SDC3-204ENST00000487984 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.02
SDC3-204ENST00000487984 OR10G7Q8NGN6 311 aa8.71□□□□□ -1.02
SDC3-204ENST00000487984 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.02
SDC3-204ENST00000487984 M0R2N4 97 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 SNRPCP09234 159 aaKnown RBP8.7□□□□□ -1.02
SDC3-204ENST00000487984 RHOBP62745 196 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 UBE2DNLQ8IWF7 75 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 TMEM37Q8WXS4 190 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 RPUSD4Q96CM3 377 aaKnown RBP8.7□□□□□ -1.02
SDC3-204ENST00000487984 DNAJC4Q9NNZ3 241 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
SDC3-204ENST00000487984 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 PLAC8L1A1L4L8 177 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 AZU1P20160 251 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 TSPOP30536 169 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
SDC3-204ENST00000487984 TAS2R45P59539 299 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 NDUFA5Q16718 116 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 LCN15Q6UWW0 184 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 BPIFA4PQ86YQ2 179 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 MRPL32Q9BYC8 188 aaKnown RBP8.69□□□□□ -1.02
SDC3-204ENST00000487984 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
SDC3-204ENST00000487984 PPP1R14DQ9NXH3 145 aa8.69□□□□□ -1.02
SDC3-204ENST00000487984 H3BTX0 84 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 SLC17A3O00476 420 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 RTL8CO15255 209 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 C10orf113Q5VZT2 155 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 FAM122CQ6P4D5 195 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 LINC01587Q99440 93 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 SLC50A1Q9BRV3 221 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
SDC3-204ENST00000487984 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 NMBP08949 121 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 CDKN1BP46527 198 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 TAS2R60P59551 318 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 FUT9Q9Y231 359 aa8.67□□□□□ -1.02
SDC3-204ENST00000487984 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 H3BQ15 152 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 HTN1P15515 57 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 PPT1P50897 306 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 RNF212Q495C1 297 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 KHDC3LQ587J8 217 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 Q6ZR54 194 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 C15orf53Q8NAA6 179 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 RAB24Q969Q5 203 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
SDC3-204ENST00000487984 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 CXorf1O96002 111 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 IFNA1P01562 189 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 FHITP49789 147 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 OR10J6PQ8NGY7 276 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 C16orf74Q96GX8 76 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 MED9Q9NWA0 146 aa8.65□□□□□ -1.02
SDC3-204ENST00000487984 F5H768 121 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 H7BYZ3 331 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 STAG3L2P0CL84 134 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 STAG3L3P0CL85 134 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
SDC3-204ENST00000487984 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 LYPD6BQ8NI32 183 aa8.64□□□□□ -1.03
SDC3-204ENST00000487984 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
SDC3-204ENST00000487984 TIMM8BQ9Y5J9 83 aaPredicted RBP8.64□□□□□ -1.03
SDC3-204ENST00000487984 LINC00862A6NCI5 91 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 CBY3A6NI87 242 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 ATP5G1P05496 136 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 ATP5G3P48201 142 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 ZNF726P1Q15940 193 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 GUK1Q16774 197 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
SDC3-204ENST00000487984 PCNPQ8WW12 178 aaKnown RBP8.63□□□□□ -1.03
SDC3-204ENST00000487984 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 NOP10Q9NPE3 64 aaKnown RBP8.63□□□□□ -1.03
SDC3-204ENST00000487984 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
SDC3-204ENST00000487984 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
SDC3-204ENST00000487984 OR7C2O60412 319 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms