RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
NUP188-207ENST00000487952 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 UBE2CO00762 179 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
NUP188-207ENST00000487952 AMBPP02760 352 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 TSPOP30536 169 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 LEPP41159 167 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 FXYD7P58549 80 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 UBE2G1P62253 170 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 TOR2AQ5JU69 321 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 CCDC28AQ8IWP9 274 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
NUP188-207ENST00000487952 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
NUP188-207ENST00000487952 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
NUP188-207ENST00000487952 A8MTW9 85 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 PDE6DO43924 150 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 ZNF138P52744 262 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
NUP188-207ENST00000487952 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 NDFIP1Q9BT67 221 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 SLC35B3Q9H1N7 401 aa10.33□□□□□ -0.76
NUP188-207ENST00000487952 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 FLI1Q01543 452 aaPredicted RBP10.32□□□□□ -0.76
NUP188-207ENST00000487952 SPINK13Q1W4C9 94 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 ZNF506Q5JVG8 444 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 TMEM75Q8N9X5 138 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 Q8TAT8 98 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 RARRES2Q99969 163 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 PSG8Q9UQ74 426 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 AGRNO00468 2067 aa10.32□□□□□ -0.76
NUP188-207ENST00000487952 TRAV34A0A0B4J273 112 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 J3KRW8 73 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 M0R2Z0 102 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 RGS13O14921 159 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 S100A9P06702 114 aaKnown RBP10.31□□□□□ -0.76
NUP188-207ENST00000487952 CDKN1BP46527 198 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 C11orf52Q96A22 123 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 SGK494Q96LW2 274 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 ASCL2Q99929 193 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
NUP188-207ENST00000487952 TRBV7-9A0A0J9YWB2 115 aa10.3□□□□□ -0.76
NUP188-207ENST00000487952 INSP01308 110 aa10.3□□□□□ -0.76
NUP188-207ENST00000487952 PEA15Q15121 130 aa10.3□□□□□ -0.76
NUP188-207ENST00000487952 LINC00479Q96M42 142 aa10.3□□□□□ -0.76
NUP188-207ENST00000487952 GPX1P07203 203 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 TMEM183BQ1AE95 376 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 Q6ZWC4 215 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 C2CD4CQ8TF44 421 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 B9D2Q9BPU9 175 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 TREM1Q9NP99 234 aa10.29□□□□□ -0.76
NUP188-207ENST00000487952 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 CRISP2P16562 243 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 CEBPGP53567 150 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 Q86TA4 180 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 ZMAT4Q9H898 229 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 GOLT1BQ9Y3E0 138 aa10.28□□□□□ -0.76
NUP188-207ENST00000487952 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 C7orf71A4D174 169 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 NDUFS6O75380 124 aaKnown RBP10.27□□□□□ -0.77
NUP188-207ENST00000487952 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.77
NUP188-207ENST00000487952 RPL35P42766 123 aaKnown RBP10.27□□□□□ -0.77
NUP188-207ENST00000487952 TAS2R60P59551 318 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 FAM19A4Q96LR4 140 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 NIPSNAP3BQ9BS92 247 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.77
NUP188-207ENST00000487952 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 SPRY2O43597 315 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
NUP188-207ENST00000487952 ZNF674Q2M3X9 581 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 SMUG1Q53HV7 270 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 BAGE2Q86Y30 109 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 C20orf144Q9BQM9 153 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 SMDT1Q9H4I9 107 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
NUP188-207ENST00000487952 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms