RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TSPAN19P0C672 248 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 CCL3L1P16619 93 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 OR10J1P30954 320 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 GZMMP51124 257 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 DYNLT3P51808 116 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 C4orf33Q8N1A6 199 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 OR4D11Q8NGI4 311 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 C12orf43Q96C57 262 aaKnown RBP2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 MALSU1Q96EH3 234 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 RERGLQ9H628 205 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 LHFPL6Q9Y693 200 aa2.29□□□□□ -2.04
PRPF38A-203ENST00000487160 TNCP24821 2201 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 TRAV27A0A087WT01 109 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 IGSF23A1L1A6 192 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 TRAPPC13A5PLN9 417 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 GGT3PA6NGU5 568 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 A8MWP6 167 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 MYL12AP19105 171 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 ALOX5APP20292 161 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 HSD11B1P28845 292 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 DDTP30046 118 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 S100A5P33763 92 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 GABRA2P47869 451 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 INSL3P51460 131 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 HIST1H3AP68431 136 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 CDK6Q00534 326 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 GLYATL3Q5SZD4 288 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 HIST2H3PS2Q5TEC6 136 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 HIST2H3AQ71DI3 136 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 OR13D1Q8NGV5 346 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 EIF5A2Q9GZV4 153 aaKnown RBP2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 TLNRD1Q9H1K6 362 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 PKHD1P08F94 4074 aa2.28□□□□□ -2.04
PRPF38A-203ENST00000487160 DNAH10Q8IVF4 4471 aa2.28□□□□□ -2.05
PRPF38A-203ENST00000487160 TRAV8-1A0A0A6YYK1 113 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 SMIM9A6NGZ8 99 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 C17orf98A8MV24 154 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 G3V3Q6 166 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 H3BSH0 61 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 M0R135 149 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR5F1O95221 314 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 SHBGP04278 402 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 MAP2K4P45985 399 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 TAS2R41P59536 307 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 IFITM2Q01629 132 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 KRR1Q13601 381 aaKnown RBP2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR6V1Q8N148 313 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR11H1Q8NG94 326 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR11H6Q8NGC7 330 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR10P1Q8NGE3 313 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR2T4Q8NH00 348 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 OR2T27Q8NH04 317 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 Q96M85 177 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 TMEM109Q9BVC6 243 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 C20orf27Q9GZN8 174 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 MED31Q9Y3C7 131 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 HSPE1-MOB4S4R3N1 261 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 HERC1Q15751 4861 aa2.27□□□□□ -2.05
PRPF38A-203ENST00000487160 M0QZK8 103 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 OVOL1O14753 267 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 ZNF73O43830 326 aaPredicted RBP2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 RBP4P02753 201 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 CRYGDP07320 174 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 BPGMP07738 259 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 IGHV3-30-3P0DP02 117 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 IFI30P13284 250 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 BRS3P32247 399 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 PPP1CCP36873 323 aaKnown RBP2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 RPS27P42677 84 aaKnown RBP2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 POLR2JP52435 117 aaKnown RBP2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 PRDX4Q13162 271 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 MINOS1Q5TGZ0 78 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 SLC35E3Q7Z769 313 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 ZNF676Q8N7Q3 588 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 NABP2Q9BQ15 211 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 UPK3BQ9BT76 320 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 RTL8AQ9BWD3 113 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 PECRQ9BY49 303 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 NMNAT1Q9HAN9 279 aaPredicted RBP2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 MINOS1-NBL1R4GNA1 71 aa2.26□□□□□ -2.05
PRPF38A-203ENST00000487160 PKD1P98161 4303 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 NUPR2A6NF83 97 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 RFPL4AA6NLU0 287 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 RFPL4AL1F8VTS6 287 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 INMT-MINDY4F8WBC2 141 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 CDC42EP2O14613 210 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 MT-CO2P00403 227 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 CD14P08571 375 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 OR5G3P0C626 314 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 ZNF728P0DKX0 622 aa2.25□□□□□ -2.05
PRPF38A-203ENST00000487160 IDO1P14902 403 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms