RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 RNF114Q9Y508 228 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 TSSC4Q9Y5U2 329 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-206ENST00000487062 V9GYV3 84 aa5.36□□□□□ -1.55
SF3A3-206ENST00000487062 MYO9AB2RTY4 2548 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 IGKV2-40A0A087WW87 121 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 TRAV8-2A0A0B4J237 113 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 TMEM213A2RRL7 107 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 ZNF705FA8MVS1 300 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 A8MWL6 223 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 OVOL1O14753 267 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 CRLF1O75462 422 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 IGKV2D-40P01614 121 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 HLA-DMBP28068 263 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 FAM3BP58499 235 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 COX19Q49B96 90 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 TCTEX1D4Q5JR98 221 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 TMEM78Q5T7P6 136 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 CFAP161Q6P656 301 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 Q71RC1 249 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 RNF182Q8N6D2 247 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 ZNF738Q8NE65 137 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 SAV1Q9H4B6 383 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
SF3A3-206ENST00000487062 SRD5A3Q9H8P0 318 aa5.35□□□□□ -1.55
SF3A3-206ENST00000487062 NBPF19A0A087WUL8 3843 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 TLN2Q9Y4G6 2542 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 A0A1B0GUS0 222 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 C19orf71A6NCJ1 209 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 C2orf70A6NJV1 201 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 TYMSP04818 313 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 CD28P10747 220 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 CBLN1P23435 193 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 ZNF138P52744 262 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 SLURP1P55000 103 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 PAFAH1B2P68402 229 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 COX8CQ7Z4L0 72 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 OR10J6PQ8NGY7 276 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 PRR25Q96S07 402 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 VGLL1Q99990 258 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 PPP1R14DQ9NXH3 145 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.55
SF3A3-206ENST00000487062 AKAP9Q99996 3911 aa5.34□□□□□ -1.56
SF3A3-206ENST00000487062 HIVEP2P31629 2446 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 XKRY2A2RUG3 117 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 FAM231BA6NCW3 169 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 IZUMO1RA6ND01 250 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 SOCS3O14543 225 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 AKR1D1P51857 326 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
SF3A3-206ENST00000487062 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 C9orf47Q6ZRZ4 202 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 LURAP1LQ8IV03 231 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 OR9G4Q8NGQ1 327 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 LINC00477Q96M19 166 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 C12orf57Q99622 126 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 CITED2Q99967 270 aaPredicted RBP5.33□□□□□ -1.56
SF3A3-206ENST00000487062 SSBP4Q9BWG4 385 aaPredicted RBP5.33□□□□□ -1.56
SF3A3-206ENST00000487062 GFRA4Q9GZZ7 299 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 NAT8BQ9UHF3 227 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 ACANP16112 2415 aa5.33□□□□□ -1.56
SF3A3-206ENST00000487062 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
SF3A3-206ENST00000487062 TRAV2A0A0B4J234 112 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 A0A1W2PRX2 142 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 FABP5P3A8MUU1 101 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 PRAC2D3DTV9 90 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 NPIPB6E9PJ23 425 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 K7EQG2 157 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 CCL24O00175 119 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 TRGC2P03986 189 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 S100A6P06703 90 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 EDN2P20800 178 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 TCL1AP56279 114 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 PROK1P58294 105 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 RPS20P60866 119 aaKnown RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 ERCC8Q13216 396 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 FAM162BQ5T6X4 162 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 WDR73Q6P4I2 378 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 RASL11AQ6T310 242 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 LINC00322Q6ZN03 302 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 WFDC3Q8IUB2 231 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 OR2D3Q8NGH3 330 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 Q8TAT8 98 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 DYNLRB2Q8TF09 96 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 DCANP1Q8TF63 244 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 DLX4Q92988 240 aaPredicted RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 C20orf173Q96LM9 149 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 ASCL2Q99929 193 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms