RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 CMC4P56277 68 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 ZNF124Q15973 351 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 CCDC28AQ8IWP9 274 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 MRPL53Q96EL3 112 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 TXNDC17Q9BRA2 123 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 AGRNO00468 2067 aa11.34□□□□□ -0.59
SEMA4D-219ENST00000486935 DNAH1Q9P2D7 4330 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 DIRC3C9JPN6 131 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 F6UB75 175 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 PEX7O00628 323 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 PEA15Q15121 130 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 MED9Q9NWA0 146 aa11.33□□□□□ -0.6
SEMA4D-219ENST00000486935 RAB19A4D1S5 217 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 CXorf65A6NEN9 183 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 F6UZH7 168 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 TCRAP04437 139 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 CEBPGP53567 150 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 RNF183Q96D59 192 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
SEMA4D-219ENST00000486935 PDE6DO43924 150 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 AKR1C3P42330 323 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 PLECQ15149 4684 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-219ENST00000486935 TRAV34A0A0B4J273 112 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 C9JQL5 133 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 K7EQM0 130 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 ERCC8Q13216 396 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 FOXI2Q6ZQN5 318 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 C11orf52Q96A22 123 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-219ENST00000486935 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
SEMA4D-219ENST00000486935 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-219ENST00000486935 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
SEMA4D-219ENST00000486935 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
SEMA4D-219ENST00000486935 VGLL1Q99990 258 aa11.29□□□□□ -0.6
SEMA4D-219ENST00000486935 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 A0A0J9YX75 114 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 UBE2G1P62253 170 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
SEMA4D-219ENST00000486935 RBAKDNA6NC62 111 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 UQCC3Q6UW78 93 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 STHQ8IWL8 128 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 Q8TAT8 98 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
SEMA4D-219ENST00000486935 RPL35P42766 123 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 FLI1Q01543 452 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 Q86TA4 180 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 SLC7A5P1Q8MH63 180 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 SLC35B3Q9H1N7 401 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 PARLQ9H300 379 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
SEMA4D-219ENST00000486935 NUPR2A6NF83 97 aa11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 H3BMM0 161 aa11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 SFTA3P0C7M3 94 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms