RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 K7EQM0 130 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 MC5RP33032 325 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
HSPG2-211ENST00000486901 NDUFS7O75251 213 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 LGALS7P47929 136 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 GTF2H5Q6ZYL4 71 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 FOXC2Q99958 501 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
HSPG2-211ENST00000486901 FASNP49327 2511 aaKnown RBP9.72□□□□□ -0.85
HSPG2-211ENST00000486901 TEX48A0A1B0GUV7 120 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 A6NDN8 102 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 I3L2K1 104 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 K7EIM0 57 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 THBDP07204 575 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 CT83Q5H943 113 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 RNASE6Q93091 150 aaKnown RBP9.71□□□□□ -0.85
HSPG2-211ENST00000486901 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 Q5PR19 223 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 GFRA4Q9GZZ7 299 aa9.71□□□□□ -0.85
HSPG2-211ENST00000486901 HBDP02042 147 aa9.71□□□□□ -0.86
HSPG2-211ENST00000486901 LINC00574Q9H8X3 128 aa9.71□□□□□ -0.86
HSPG2-211ENST00000486901 SOX21Q9Y651 276 aaPredicted RBP9.71□□□□□ -0.86
HSPG2-211ENST00000486901 HIVEP2P31629 2446 aa9.71□□□□□ -0.86
HSPG2-211ENST00000486901 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 PRAC2D3DTV9 90 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 BUB1B-PAK6H3BSN5 160 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 PLA2G2CQ5R387 149 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 APOBEC3AP31941 199 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-211ENST00000486901 ACANP16112 2415 aa9.7□□□□□ -0.86
HSPG2-211ENST00000486901 HRNRQ86YZ3 2850 aaPredicted RBP9.69□□□□□ -0.86
HSPG2-211ENST00000486901 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 VSTM5A8MXK1 200 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 NDUFA3O95167 84 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 DEFB1P60022 68 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 JKAMPQ9P055 326 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 E7EQL1 145 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 TRAV40A0A0B4J280 105 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 K7EP34 96 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 GRNP28799 593 aaKnown RBP9.69□□□□□ -0.86
HSPG2-211ENST00000486901 EFNA4P52798 201 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 SEC11AP67812 179 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 PAX2Q02962 417 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
HSPG2-211ENST00000486901 VPS13CQ709C8 3753 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 A0A1W2PPM0 123 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 FABP2P12104 132 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 TGFAP01135 160 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 DLX6P56179 175 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 WFDC2Q14508 124 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
HSPG2-211ENST00000486901 TRGV3P03979 118 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 ADAMTSL5Q6ZMM2 481 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 NCOR1P1Q9H4R4 102 aa9.68□□□□□ -0.86
HSPG2-211ENST00000486901 H3BMG7 143 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 H3BRM9 83 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 NDPQ00604 133 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 FAM169BQ8N8A8 192 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 H3BRN7 92 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 HSD52Q0P140 79 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 LINC00527Q9UJ94 153 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 LY6DQ14210 128 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 ETDBQ3ZM63 59 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 ARPC1AQ92747 370 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 NPFFR1Q9GZQ6 430 aa9.67□□□□□ -0.86
HSPG2-211ENST00000486901 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 TMEM8BA6NDV4 472 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 SMIM13P0DJ93 91 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 EMP1P54849 157 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 RBPJQ06330 500 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 IL17RELQ6ZVW7 336 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 PRR25Q96S07 402 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 CHAC1Q9BUX1 264 aa9.66□□□□□ -0.86
HSPG2-211ENST00000486901 G3V4G9 280 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 INSL3P51460 131 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 IGFL2Q6UWQ7 119 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 DYNAPQ8N1N2 210 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 SMIM12Q96EX1 92 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 CCL21O00585 134 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 IGLV1-47P01700 117 aa9.65□□□□□ -0.86
HSPG2-211ENST00000486901 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.87
HSPG2-211ENST00000486901 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.87
HSPG2-211ENST00000486901 CLEC2AQ6UVW9 174 aa9.65□□□□□ -0.87
HSPG2-211ENST00000486901 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms