RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 LY6EQ16553 131 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 C10orf55Q5SWW7 151 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 HCP5Q6MZN7 132 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 TMEM75Q8N9X5 138 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 RCHY1Q96PM5 261 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 NDFIP1Q9BT67 221 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 MLST8Q9BVC4 326 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 RPH3ALQ9UNE2 315 aa7.05□□□□□ -1.28
COL12A1-208ENST00000486533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.04□□□□□ -1.28
COL12A1-208ENST00000486533 TRAV34A0A0B4J273 112 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 C19orf71A6NCJ1 209 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
COL12A1-208ENST00000486533 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 IGLV1-47P01700 117 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 PDE6HQ13956 83 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 MORN5Q5VZ52 161 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 OR2D3Q8NGH3 330 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
COL12A1-208ENST00000486533 SLC25A39Q9BZJ4 359 aaPredicted RBP7.04□□□□□ -1.28
COL12A1-208ENST00000486533 C16orf95Q9H693 158 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 AAMDCQ9H7C9 122 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
COL12A1-208ENST00000486533 OOSP1A8MZH6 123 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 CNIH1O95406 144 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 CA1P00915 261 aaPredicted RBP7.03□□□□□ -1.28
COL12A1-208ENST00000486533 IGLC1P0CG04 106 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 G0S2P27469 103 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 CSN1S1P47710 185 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 GNG5P63218 68 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
COL12A1-208ENST00000486533 PSG9Q00887 426 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 BATFQ16520 125 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 C11orf42Q8N5U0 333 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 Q8N976 141 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 PMCHL2Q9BQD1 86 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 MAP1LC3CQ9BXW4 147 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 THYN1Q9P016 225 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 LOC102724200A0A096LPH7 203 aaPredicted RBP7.03□□□□□ -1.28
COL12A1-208ENST00000486533 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 TEX22C9J3V5 150 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 E7EUB6 86 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 GHRHP01286 108 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 PSG1P11464 419 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
COL12A1-208ENST00000486533 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
COL12A1-208ENST00000486533 LHFPL4Q7Z7J7 247 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 AJUBAQ96IF1 538 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 LINC00479Q96M42 142 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 SHANK2-AS3Q9BTD1 123 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 TMEM208Q9BTX3 173 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 MEGF9Q9H1U4 602 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 MS4A6AQ9H2W1 248 aa7.03□□□□□ -1.28
COL12A1-208ENST00000486533 H3BRN7 92 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 NBR2O15453 112 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
COL12A1-208ENST00000486533 FRMD6-AS1P0C7T7 363 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 HTR1DP28221 377 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 PSMG4Q5JS54 123 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
COL12A1-208ENST00000486533 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 I3L2K1 104 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 HLA-DRB1P01911 266 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 TSPOP30536 169 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 RAB9AP51151 201 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 DIAPH2-AS1Q14236 149 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 MRGPRG-AS1Q2M3A8 158 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 Q56UQ5 140 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 Q6ZS46 218 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 GOLT1AQ6ZVE7 132 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 TCF24Q7RTU0 167 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 ZNF738Q8NE65 137 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 NPFFR1Q9GZQ6 430 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 MRPL36Q9P0J6 103 aaKnown RBP7.01□□□□□ -1.29
COL12A1-208ENST00000486533 DPM3Q9P2X0 92 aa7.01□□□□□ -1.29
COL12A1-208ENST00000486533 IGHV3-72A0A0B4J1Y9 119 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 NPIPB5A8MRT5 1133 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 ODF3BA8MYP8 253 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 F8W735 103 aaPredicted RBP7□□□□□ -1.29
COL12A1-208ENST00000486533 SYS1-DBNDD2H3BUS1 97 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 GNG7O60262 68 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 RPL7P18124 248 aaKnown RBP7□□□□□ -1.29
COL12A1-208ENST00000486533 MFAP4P55083 255 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 PSG3Q16557 428 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 TDRG1Q3Y452 100 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 SAPCD1Q5SSQ6 148 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 C16orf54Q6UWD8 224 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 FA2HQ7L5A8 372 aa7□□□□□ -1.29
COL12A1-208ENST00000486533 TMEM219Q86XT9 240 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms