RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C7orf71A4D174 169 aa9.14□□□□□ -0.95
CHMP3-208ENST00000486404 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 SLC25A5P05141 298 aaKnown RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 ZNF266Q14584 549 aa9.14□□□□□ -0.95
CHMP3-208ENST00000486404 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 RNASE8Q8TDE3 154 aaKnown RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 RNF141Q8WVD5 230 aa9.14□□□□□ -0.95
CHMP3-208ENST00000486404 LINC00477Q96M19 166 aa9.14□□□□□ -0.95
CHMP3-208ENST00000486404 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
CHMP3-208ENST00000486404 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 F5H768 121 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 ATP5G1P05496 136 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 ATP5G3P48201 142 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
CHMP3-208ENST00000486404 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 C15orf53Q8NAA6 179 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 PYGO2Q9BRQ0 406 aa9.13□□□□□ -0.95
CHMP3-208ENST00000486404 GPX1P07203 203 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 GIPP09681 153 aaPredicted RBP9.12□□□□□ -0.95
CHMP3-208ENST00000486404 M6PRP20645 277 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 RAB2AP61019 212 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
CHMP3-208ENST00000486404 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 RGS21Q2M5E4 152 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 HSD17B11Q8NBQ5 300 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 Q9H3A6 140 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
CHMP3-208ENST00000486404 CBY3A6NI87 242 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 KLLNB2CW77 178 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 RNASE4P34096 147 aaKnown RBP9.11□□□□□ -0.95
CHMP3-208ENST00000486404 FAM74A1Q5RGS3 127 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 LYPD1Q8N2G4 141 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 INO80EQ8NBZ0 244 aaPredicted RBP9.11□□□□□ -0.95
CHMP3-208ENST00000486404 Q8TAT8 98 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 AQP10Q96PS8 301 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 RPH3ALQ9UNE2 315 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
CHMP3-208ENST00000486404 FXYD6-FXYD2A0A087WZ82 144 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 RGS13O14921 159 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 NMBP08949 121 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 CRISP2P16562 243 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 ZNF138P52744 262 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 OR10G9Q8NGN4 311 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 OR10G7Q8NGN6 311 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 RXFP4Q8TDU9 374 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 ZNF503Q96F45 646 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 VGLL1Q99990 258 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 ARPC5LQ9BPX5 153 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 ATG101Q9BSB4 218 aa9.1□□□□□ -0.95
CHMP3-208ENST00000486404 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 EIF3GO75821 320 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHMP3-208ENST00000486404 GAGE7O76087 117 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 NUDT3O95989 172 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 CDC34P49427 236 aaPredicted RBP9.09□□□□□ -0.95
CHMP3-208ENST00000486404 CD300CQ08708 224 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 EIF4E3Q8N5X7 224 aaKnown RBP9.09□□□□□ -0.95
CHMP3-208ENST00000486404 FAM19A4Q96LR4 140 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 HYLS1Q96M11 299 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 PSMG3Q9BT73 122 aaPredicted RBP9.09□□□□□ -0.95
CHMP3-208ENST00000486404 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 ZNF492Q9P255 531 aa9.09□□□□□ -0.95
CHMP3-208ENST00000486404 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 LCE2BO14633 110 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 MBP02144 154 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 RNF212Q495C1 297 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 OR2T35Q8NGX2 323 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 OR2G3Q8NGZ4 309 aa9.08□□□□□ -0.96
CHMP3-208ENST00000486404 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 BORCS7-ASMTA0A0B4J1R7 106 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 DIRC3C9JPN6 131 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 M0R2N4 97 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 HMGB3O15347 200 aaKnown RBP9.07□□□□□ -0.96
CHMP3-208ENST00000486404 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 OR5I1Q13606 314 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 PRR9Q5T870 116 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 ZFAND2AQ8N6M9 145 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 GSN-AS1Q9NRJ2 163 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
CHMP3-208ENST00000486404 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 IGLV2-18A0A075B6J9 118 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 DAZ2Q13117 558 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms