RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
MCF2L-226ENST00000486210 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 PRELID1Q9Y255 219 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 DNAH17Q9UFH2 4485 aa12.79□□□□□ -0.36
MCF2L-226ENST00000486210 TRAV1-1A0A0B4J248 108 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-226ENST00000486210 IGKV3-20P01619 116 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 EBLN2Q6P2I7 272 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 ZNF680Q8NEM1 530 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
MCF2L-226ENST00000486210 PKHD1P08F94 4074 aa12.77□□□□□ -0.36
MCF2L-226ENST00000486210 FAM74A7A6NL05 159 aa12.77□□□□□ -0.37
MCF2L-226ENST00000486210 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
MCF2L-226ENST00000486210 HIST1H1AQ02539 215 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-226ENST00000486210 C11orf45Q8TAV5 145 aa12.77□□□□□ -0.37
MCF2L-226ENST00000486210 PCNPQ8WW12 178 aaKnown RBP12.77□□□□□ -0.37
MCF2L-226ENST00000486210 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.37
MCF2L-226ENST00000486210 AGRNO00468 2067 aa12.76□□□□□ -0.37
MCF2L-226ENST00000486210 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-226ENST00000486210 A0A1W2PRE2 83 aa12.76□□□□□ -0.37
MCF2L-226ENST00000486210 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-226ENST00000486210 CNN1P51911 297 aaKnown RBP12.76□□□□□ -0.37
MCF2L-226ENST00000486210 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
MCF2L-226ENST00000486210 GNG5P63218 68 aa12.76□□□□□ -0.37
MCF2L-226ENST00000486210 ERCC8Q13216 396 aa12.76□□□□□ -0.37
MCF2L-226ENST00000486210 OR4B1Q8NGF8 309 aa12.76□□□□□ -0.37
MCF2L-226ENST00000486210 DNAH11Q96DT5 4516 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 PAGE4O60829 102 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 HBE1P02100 147 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
MCF2L-226ENST00000486210 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
MCF2L-226ENST00000486210 BLOC1S1P78537 153 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 IFITM2Q01629 132 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
MCF2L-226ENST00000486210 A8MTW9 85 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-226ENST00000486210 ATP5G3P48201 142 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 FXYD7P58549 80 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 VGLL1Q99990 258 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 GNG13Q9P2W3 67 aa12.74□□□□□ -0.37
MCF2L-226ENST00000486210 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
MCF2L-226ENST00000486210 IFNA7P01567 189 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 CSN1S1P47710 185 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 OR10J6PQ8NGY7 276 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 LYPD6BQ8NI32 183 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 SLC35B3Q9H1N7 401 aa12.73□□□□□ -0.37
MCF2L-226ENST00000486210 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 TEX46H3BTG2 121 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 CT45A10P0DMU9 189 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 AGPAT4-IT1Q9H0P7 198 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
MCF2L-226ENST00000486210 A0A1B0GVY2 172 aa12.71□□□□□ -0.37
MCF2L-226ENST00000486210 PPT1P50897 306 aa12.71□□□□□ -0.37
MCF2L-226ENST00000486210 TCTAP57738 103 aa12.71□□□□□ -0.37
MCF2L-226ENST00000486210 MORN3Q6PF18 240 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-226ENST00000486210 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.37
MCF2L-226ENST00000486210 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
MCF2L-226ENST00000486210 MUC4Q99102 2169 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 TCRAP04437 139 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 ARL6IP6Q8N6S5 226 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 SGK494Q96LW2 274 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 MANBALQ9NQG1 85 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
MCF2L-226ENST00000486210 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 M0R2Z0 102 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 DEFB4AO15263 64 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 NMBP08949 121 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 KIR3DS1Q14943 382 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 Q8TAT8 98 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 LINC00477Q96M19 166 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 LINC00479Q96M42 142 aa12.69□□□□□ -0.38
MCF2L-226ENST00000486210 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-226ENST00000486210 PKD1P98161 4303 aa12.68□□□□□ -0.38
MCF2L-226ENST00000486210 FAM19A4Q96LR4 140 aa12.68□□□□□ -0.38
MCF2L-226ENST00000486210 XCL2Q9UBD3 114 aa12.68□□□□□ -0.38
MCF2L-226ENST00000486210 TRAV34A0A0B4J273 112 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 PEX7O00628 323 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-226ENST00000486210 BCL2P10415 239 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 MIFP14174 115 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 ATG101Q9BSB4 218 aa12.67□□□□□ -0.38
MCF2L-226ENST00000486210 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms