RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 GCGP01275 180 aa10.8□□□□□ -0.68
COL9A1-207ENST00000486080 PAFAH1B2P68402 229 aa10.8□□□□□ -0.68
COL9A1-207ENST00000486080 SPATA3Q8NHX4 192 aa10.8□□□□□ -0.68
COL9A1-207ENST00000486080 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
COL9A1-207ENST00000486080 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
COL9A1-207ENST00000486080 A0A087WWC5 75 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 PSMG4Q5JS54 123 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 PRR27Q6MZM9 219 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 C8orf49Q96NF6 230 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 GPR61Q9BZJ8 451 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
COL9A1-207ENST00000486080 MT-ND4LP03901 98 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
COL9A1-207ENST00000486080 AGRNO00468 2067 aa10.78□□□□□ -0.68
COL9A1-207ENST00000486080 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
COL9A1-207ENST00000486080 SNRPD3P62318 126 aaKnown RBP10.78□□□□□ -0.68
COL9A1-207ENST00000486080 LINC00322Q6ZN03 302 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-207ENST00000486080 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
COL9A1-207ENST00000486080 ZC2HC1AQ96GY0 325 aa10.78□□□□□ -0.68
COL9A1-207ENST00000486080 PRR25Q96S07 402 aa10.78□□□□□ -0.68
COL9A1-207ENST00000486080 GDF5OSQ5U4N7 250 aa10.77□□□□□ -0.68
COL9A1-207ENST00000486080 OR8A1Q8NGG7 326 aa10.77□□□□□ -0.68
COL9A1-207ENST00000486080 SMIM12Q96EX1 92 aa10.77□□□□□ -0.68
COL9A1-207ENST00000486080 COL6A5A8TX70 2615 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.69
COL9A1-207ENST00000486080 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF747Q9BV97 191 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 SMCO4Q9NRQ5 59 aa10.77□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF256Q9Y2P7 627 aaPredicted RBP10.77□□□□□ -0.69
COL9A1-207ENST00000486080 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 TRAV25A0A0B4J276 109 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 FBLL1A6NHQ2 334 aaKnown RBP10.76□□□□□ -0.69
COL9A1-207ENST00000486080 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 H7BYZ3 331 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 IGLV1-51P01701 117 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 CD33P20138 364 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 CRIP1P50238 77 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF138P52744 262 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
COL9A1-207ENST00000486080 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF492Q9P255 531 aa10.76□□□□□ -0.69
COL9A1-207ENST00000486080 SAPCD1Q5SSQ6 148 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 IBA57Q5T440 356 aaKnown RBP10.75□□□□□ -0.69
COL9A1-207ENST00000486080 NUDT10Q8NFP7 164 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 NUDT11Q96G61 164 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
COL9A1-207ENST00000486080 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 URGCP-MRPS24S4R325 110 aa10.75□□□□□ -0.69
COL9A1-207ENST00000486080 DEFB131AP59861 70 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 C3orf56Q8N813 242 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 V9GYV3 84 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 TRRAPQ9Y4A5 3859 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 ANK2Q01484 3957 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 C19orf71A6NCJ1 209 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 OR4C46A6NHA9 309 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF124Q15973 351 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 C15orf54Q8N8G6 183 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 TMEM158Q8WZ71 300 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
COL9A1-207ENST00000486080 A0A0J9YX75 114 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 PPP1R2P9O14990 202 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-207ENST00000486080 C12orf54Q6X4T0 127 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
COL9A1-207ENST00000486080 CXorf65A6NEN9 183 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 ZNF705GA8MUZ8 300 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-207ENST00000486080 YPEL4Q96NS1 127 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 SAV1Q9H4B6 383 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-207ENST00000486080 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 BIN3Q9NQY0 253 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 GATCO43716 136 aaKnown RBP10.72□□□□□ -0.69
COL9A1-207ENST00000486080 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 SMUG1Q53HV7 270 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 PRR9Q5T870 116 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
COL9A1-207ENST00000486080 DAZAP1Q96EP5 407 aaKnown RBP10.72□□□□□ -0.69
COL9A1-207ENST00000486080 COLCA2A8K830 154 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 J3KRW8 73 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 SH2D1AO60880 128 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.69
COL9A1-207ENST00000486080 FAM3BP58499 235 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms