RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TRAV12-3A0A0B4J271 114 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 LY6G6CO95867 125 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 FAM74A1Q5RGS3 127 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 RAB24Q969Q5 203 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 VGLL1Q99990 258 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 C20orf144Q9BQM9 153 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
SNX17-206ENST00000484886 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
SNX17-206ENST00000484886 DEFB131BA0A096LNP1 70 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 AZU1P20160 251 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 DAD1P61803 113 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 C9orf47Q6ZRZ4 202 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 C16orf74Q96GX8 76 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
SNX17-206ENST00000484886 PGPA6NDG6 321 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 SLC25A5P05141 298 aaKnown RBP13.67□□□□□ -0.22
SNX17-206ENST00000484886 GPX1P07203 203 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 HTN3P15516 51 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
SNX17-206ENST00000484886 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 RXFP4Q8TDU9 374 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 LINC00476Q8WZB0 136 aa13.67□□□□□ -0.22
SNX17-206ENST00000484886 C7orf71A4D174 169 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 STAG3L2P0CL84 134 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 STAG3L3P0CL85 134 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 GCHFRP30047 84 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 AKR1C8PQ5T2L2 129 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 Q8TAT8 98 aa13.66□□□□□ -0.22
SNX17-206ENST00000484886 LYRM9A8MSI8 78 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 DIRC3C9JPN6 131 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 CXorf1O96002 111 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 ZNF138P52744 262 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 BTN1A1Q13410 526 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 ARPC5LQ9BPX5 153 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 ZNF492Q9P255 531 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 RYR3Q15413 4870 aa13.65□□□□□ -0.22
SNX17-206ENST00000484886 ALMS1Q8TCU4 4167 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 LYSTQ99698 3801 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 IGHV4-4A0A075B6R2 117 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 RBAKDNA6NC62 111 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 DEFB130BP0DP73 79 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 DEFB130AP0DP74 79 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 TCTAP57738 103 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 CD300CQ08708 224 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 ZNF345Q14585 488 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 ZNF493Q6ZR52 646 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 KCNRGQ8N5I3 272 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 OR11H4Q8NGC9 324 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 TMEM263Q8WUH6 116 aaKnown RBP13.64□□□□□ -0.23
SNX17-206ENST00000484886 FAM19A4Q96LR4 140 aa13.64□□□□□ -0.23
SNX17-206ENST00000484886 HMSDA8MTL9 139 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 KLLNB2CW77 178 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 CRISP2P16562 243 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 PYGO2Q9BRQ0 406 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 CYTL1Q9NRR1 136 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 TMEM167BQ9NRX6 74 aa13.63□□□□□ -0.23
SNX17-206ENST00000484886 TIMM8BQ9Y5J9 83 aaPredicted RBP13.63□□□□□ -0.23
SNX17-206ENST00000484886 A0A0D9SG52 128 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 CTXND1A0A1B0GTU2 59 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 KANTRA0A1W2PQU2 76 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 PLAC8L1A1L4L8 177 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 GOLT1AQ6ZVE7 132 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 SSX7Q7RTT5 188 aa13.62□□□□□ -0.23
SNX17-206ENST00000484886 RNASE8Q8TDE3 154 aaKnown RBP13.62□□□□□ -0.23
SNX17-206ENST00000484886 NOP10Q9NPE3 64 aaKnown RBP13.62□□□□□ -0.23
SNX17-206ENST00000484886 PLECQ15149 4684 aaKnown RBP13.61□□□□□ -0.23
SNX17-206ENST00000484886 SNURFLB1AK76 121 aa13.61□□□□□ -0.23
SNX17-206ENST00000484886 NMBP08949 121 aa13.61□□□□□ -0.23
SNX17-206ENST00000484886 GNG5P63218 68 aa13.61□□□□□ -0.23
SNX17-206ENST00000484886 ZFAND2AQ8N6M9 145 aa13.61□□□□□ -0.23
SNX17-206ENST00000484886 ZNF471Q9BX82 626 aaPredicted RBP13.61□□□□□ -0.23
SNX17-206ENST00000484886 APLNQ9ULZ1 77 aa13.61□□□□□ -0.23
SNX17-206ENST00000484886 SACSQ9NZJ4 4579 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 RYR2Q92736 4967 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 CBY3A6NI87 242 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 RGS13O14921 159 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 PFDN1O60925 122 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 PRR9Q5T870 116 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 ST6GAL2Q96JF0 529 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 NDUFAF3Q9BU61 184 aa13.6□□□□□ -0.23
SNX17-206ENST00000484886 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
SNX17-206ENST00000484886 BCL2L11O43521 198 aa13.59□□□□□ -0.23
SNX17-206ENST00000484886 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
SNX17-206ENST00000484886 LGALS9CQ6DKI2 356 aa13.59□□□□□ -0.23
SNX17-206ENST00000484886 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
SNX17-206ENST00000484886 hCG_2014768A0A024R1R8 64 aa13.58□□□□□ -0.24
SNX17-206ENST00000484886 ZNF324O75467 553 aaPredicted RBP13.58□□□□□ -0.24
SNX17-206ENST00000484886 FGF8P55075 233 aaPredicted RBP13.58□□□□□ -0.24
SNX17-206ENST00000484886 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
SNX17-206ENST00000484886 ARL6IP6Q8N6S5 226 aa13.58□□□□□ -0.24
SNX17-206ENST00000484886 ZNF680Q8NEM1 530 aa13.58□□□□□ -0.24
SNX17-206ENST00000484886 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 K7EQM0 130 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 SUMO1P63165 101 aaKnown RBP13.57□□□□□ -0.24
SNX17-206ENST00000484886 Q6ZNX1 250 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 TMUB2Q71RG4 321 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 SUN5Q8TC36 379 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms