RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 LRP1Q07954 4544 aaKnown RBP0.02□□□□□ -2.41
ERCC8-206ENST00000484330 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
ERCC8-206ENST00000484330 ZGRF1Q86YA3 2104 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 TRACP01848 142 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 EVI2AP22794 236 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 RPL19P84098 196 aaKnown RBP0.01□□□□□ -2.41
ERCC8-206ENST00000484330 POU6F1Q14863 301 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 TMED4Q7Z7H5 227 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 PLEKHB2Q96CS7 222 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 STOML2Q9UJZ1 356 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 ADGBQ8N7X0 1667 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 PTPRDP23468 1912 aa0.01□□□□□ -2.41
ERCC8-206ENST00000484330 BBIP1A8MTZ0 92 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 CD3DP04234 171 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 NDUFA6P56556 154 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 TCTAP57738 103 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 GLYATL3Q5SZD4 288 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 LYG2Q86SG7 212 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 ISOC1Q96CN7 298 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 CIB3Q96Q77 187 aaPredicted RBP0□□□□□ -2.41
ERCC8-206ENST00000484330 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 SS18L2Q9UHA2 77 aa0□□□□□ -2.41
ERCC8-206ENST00000484330 MYO5AQ9Y4I1 1855 aaKnown RBP0□□□□□ -2.41
ERCC8-206ENST00000484330 OTOGQ6ZRI0 2925 aa-0□□□□□ -2.41
ERCC8-206ENST00000484330 TPRP12270 2363 aaKnown RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 DOCK4Q8N1I0 1966 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 LOC285556D6RIA3 1793 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 N4BP2Q86UW6 1770 aaPredicted RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 C3orf85A0A1B0GTC6 90 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 LY6G6CO95867 125 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 RPL37P61927 97 aaKnown RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 SNRPD3P62318 126 aaKnown RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 IZUMO2Q6UXV1 221 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 C3orf62Q6ZUJ4 267 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 CCL4L1Q8NHW4 92 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 HRNRQ86YZ3 2850 aaPredicted RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 UBR5O95071 2799 aaPredicted RBP-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 KIAA1549LQ6ZVL6 1849 aa-0.01□□□□□ -2.41
ERCC8-206ENST00000484330 KDM6BO15054 1643 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 CELSR1Q9NYQ6 3014 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 SPTBP11277 2137 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 ARL5CA6NH57 179 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 CSN2P05814 226 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 TPT1P13693 172 aaKnown RBP-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 GNG3P63215 75 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 CCSMST1Q4G0I0 132 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 ANGPTL5Q86XS5 388 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 TCTEX1D1Q8N7M0 179 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 DIRC1Q969H9 104 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 BORCS8Q96FH0 119 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 IL20Q9NYY1 176 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 MRPL35Q9NZE8 188 aaKnown RBP-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 USP54Q70EL1 1684 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 CTTNBP2Q8WZ74 1663 aa-0.02□□□□□ -2.41
ERCC8-206ENST00000484330 TRAPPC8Q9Y2L5 1435 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 DSPPQ9NZW4 1301 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 A0A1W2PPB8 328 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 A0A1W2PRS3 328 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 KIR3DP1A8MWS1 328 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 MFSD11O43934 449 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 SAA1P0DJI8 122 aaPredicted RBP-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 FABP2P12104 132 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 DNAJB13P59910 316 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 MRPS15P82914 257 aaKnown RBP-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 TMEM229BQ8NBD8 167 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 MED11Q9P086 117 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 NUBP2Q9Y5Y2 271 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 ATG2AQ2TAZ0 1938 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 ANK1P16157 1881 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 ANKRD31Q8N7Z5 1873 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 POLQO75417 2590 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 ABCA12Q86UK0 2595 aa-0.03□□□□□ -2.41
ERCC8-206ENST00000484330 RBBP6Q7Z6E9 1792 aaKnown RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 TTC28Q96AY4 2481 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 EIF3AQ14152 1382 aaKnown RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 PFDN1O60925 122 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 LTC4SQ16873 150 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 STX19Q8N4C7 294 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 FAM24BQ8N5W8 94 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 OR5H6Q8NGV6 325 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 OTORQ9NRC9 128 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 MAP2P11137 1827 aaKnown RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 HIVEP3Q5T1R4 2406 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 CACNA1HO95180 2353 aa-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 YTHDC2Q9H6S0 1430 aaKnown RBP-0.04□□□□□ -2.42
ERCC8-206ENST00000484330 MYH2Q9UKX2 1941 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 UNC79Q9P2D8 2635 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 DEFB132Q7Z7B7 95 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 CLEC2BQ92478 149 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 AP3S1Q92572 193 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 PRELID3AQ96N28 172 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 BIN3Q9NQY0 253 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 C19orf12Q9NSK7 152 aa-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 TCOF1Q13428 1488 aaKnown RBP-0.05□□□□□ -2.42
ERCC8-206ENST00000484330 JMJD1CQ15652 2540 aa-0.06□□□□□ -2.42
ERCC8-206ENST00000484330 AFDNP55196 1824 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms