RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 PPP1R17O96001 155 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 CA1P00915 261 aaPredicted RBP3.69□□□□□ -1.82
SSBP1-211ENST00000484178 FRMD6-AS1P0C7T7 363 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV1-8P0DP01 117 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 GATA2P23769 480 aaPredicted RBP3.69□□□□□ -1.82
SSBP1-211ENST00000484178 DLX6P56179 175 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 KRTAP24-1Q3LI83 254 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 LINC01620Q4KN68 170 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 FAM104BQ5XKR9 115 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 UFSP1Q6NVU6 142 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 PRSS57Q6UWY2 283 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 LRRC75A-AS1Q8N1F1 130 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 FAM216BQ8N7L0 139 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 TMEM105Q8N8V8 129 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 OR10W1Q8NGF6 305 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 OR2K2Q8NGT1 345 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 FAM57AQ8TBR7 257 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 SRSF12Q8WXF0 261 aaKnown RBP3.69□□□□□ -1.82
SSBP1-211ENST00000484178 ZNF414Q96IQ9 312 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 PRELID3AQ96N28 172 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 MAP1LC3AQ9H492 121 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 RALYQ9UKM9 306 aaKnown RBP3.69□□□□□ -1.82
SSBP1-211ENST00000484178 FZR1Q9UM11 496 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 PSG8Q9UQ74 426 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 INSIG2Q9Y5U4 225 aa3.69□□□□□ -1.82
SSBP1-211ENST00000484178 CHD3Q12873 2000 aaKnown RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 MUC21A0A0G2JKD1 596 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 MUC21A0A140T8X8 626 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 A0A1W2PNU3 283 aaPredicted RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 WI2-2373I1.2A0A1W2PRP0 233 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 F8W1H4 67 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 I3L2K1 104 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 CDX4O14627 284 aaPredicted RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 IGLV1-47P01700 117 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 IGLV2-11P01706 119 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 SMIM13P0DJ93 91 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 EVI2AP22794 236 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 GPR6P46095 362 aaPredicted RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 CACNG7P62955 275 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 GAGE5Q13069 117 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 GAGE6Q13070 117 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 KLK9Q2XQG4 91 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 MUC21Q5SSG8 566 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 LDLRAD2Q5SZI1 272 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 AMMECR1LQ6DCA0 310 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 MOB3BQ86TA1 216 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 ATOH7Q8N100 152 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 FDCSPQ8NFU4 85 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 LEAP2Q969E1 77 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 RPEQ96AT9 228 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 IFI27L1Q96BM0 104 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 KLK9Q9UKQ9 250 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 CHTOPQ9Y3Y2 248 aaKnown RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 GON4LQ3T8J9 2241 aa3.68□□□□□ -1.82
SSBP1-211ENST00000484178 COL27A1Q8IZC6 1860 aaPredicted RBP3.68□□□□□ -1.82
SSBP1-211ENST00000484178 USF3Q68DE3 2245 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 RTTNQ86VV8 2226 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 CACNA1GO43497 2377 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 KIAA2026Q5HYC2 2103 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV1-3A0A0C4DH29 117 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 A0A0G2JLM5 398 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 OR2T8A6NH00 312 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 G3V4G9 280 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 BUB1B-PAK6H3BSN5 160 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 H3BTX0 84 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 M0R1W7 72 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 ENSAO43768 121 aaKnown RBP3.67□□□□□ -1.82
SSBP1-211ENST00000484178 SAP30O75446 220 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 NDUFA3O95167 84 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 SLC25A16P16260 332 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 PLNP26678 52 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 LOXP28300 417 aaPredicted RBP3.67□□□□□ -1.82
SSBP1-211ENST00000484178 FCER1GP30273 86 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 CKS2P33552 79 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 LYZP61626 148 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 GNG5P63218 68 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
SSBP1-211ENST00000484178 ZNF841Q6ZN19 808 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 C2orf91Q6ZV80 131 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 NEGR1Q7Z3B1 354 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 KIR3DL3Q8N743 410 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 FER1L6-AS1Q8NA97 138 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 DEFB108BQ8NET1 73 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 NPBQ8NG41 125 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 SLC50A1Q9BRV3 221 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 DYNLRB1Q9NP97 96 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 LENEPQ9Y5L5 61 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 ARHGAP21Q5T5U3 1957 aa3.67□□□□□ -1.82
SSBP1-211ENST00000484178 MYO9BQ13459 2157 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 MED12Q93074 2177 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 IGHV4-4A0A075B6R2 117 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 TRAV26-1A0A087WT03 109 aa3.66□□□□□ -1.82
SSBP1-211ENST00000484178 TRAV12-1A0A0B4J245 112 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms