RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 M0R3E3 92 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 GAGE7O76087 117 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 GAGE12FP0CL80 117 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 GAGE12GP0CL81 117 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 GAGE12IP0CL82 117 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 PYYP10082 97 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 CCDC28AQ8IWP9 274 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 RNF141Q8WVD5 230 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 PFDN5Q99471 154 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 ATP5SQ99766 215 aa13.47□□□□□ -0.25
NDUFA3-213ENST00000484103 CLINT1Q14677 625 aa13.46□□□□□ -0.25
NDUFA3-213ENST00000484103 SOHLH1Q5JUK2 328 aa13.46□□□□□ -0.25
NDUFA3-213ENST00000484103 HYLS1Q96M11 299 aa13.46□□□□□ -0.25
NDUFA3-213ENST00000484103 WFDC1Q9HC57 220 aa13.46□□□□□ -0.25
NDUFA3-213ENST00000484103 PKD1P98161 4303 aa13.46□□□□□ -0.26
NDUFA3-213ENST00000484103 LEPP41159 167 aa13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 RPL29P47914 159 aaKnown RBP13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 EXOC3-AS1Q8N2X6 119 aa13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 KCNRGQ8N5I3 272 aa13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 SMIM3Q9BZL3 60 aa13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
NDUFA3-213ENST00000484103 DYNC1H1Q14204 4646 aaKnown RBP13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 SNURFLB1AK76 121 aa13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 GUK1Q16774 197 aa13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 ZFP69Q49AA0 526 aa13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 ZNF493Q6ZR52 646 aa13.44□□□□□ -0.26
NDUFA3-213ENST00000484103 TRBV19A0A075B6N1 114 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 PFDN1O60925 122 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 NPCDR1Q9BY65 106 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 LINC00588Q9Y4M8 146 aa13.43□□□□□ -0.26
NDUFA3-213ENST00000484103 IGKV2-40A0A087WW87 121 aaPredicted RBP13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 A0A0D9SG52 128 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 MPDU1O75352 247 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 IGKV2D-40P01614 121 aaPredicted RBP13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 CCL18P55774 89 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 BTN1A1Q13410 526 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 FAM122CQ6P4D5 195 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 ZNRF2Q8NHG8 242 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 GNPNAT1Q96EK6 184 aaPredicted RBP13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
NDUFA3-213ENST00000484103 TAAR5O14804 337 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 NDUFB4O95168 129 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 HOXA5P20719 270 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 ZNF266Q14584 549 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 LGALSLQ3ZCW2 172 aaPredicted RBP13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 SSX7Q7RTT5 188 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 TMPRSS5Q9H3S3 457 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 CYTL1Q9NRR1 136 aa13.41□□□□□ -0.26
NDUFA3-213ENST00000484103 NBDYA0A0U1RRE5 68 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 HIST1H1EP10412 219 aaKnown RBP13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 RNASE4P34096 147 aaKnown RBP13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 ICAM4Q14773 271 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 Q6ZTI0 123 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 ARPC5LQ9BPX5 153 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 GSN-AS1Q9NRJ2 163 aa13.4□□□□□ -0.26
NDUFA3-213ENST00000484103 C7orf71A4D174 169 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 BCL2L11O43521 198 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 IFNA5P01569 189 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 OR10J4P0C629 311 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 M6PRP20645 277 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 TNP2Q05952 138 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 AGPAT4-IT1Q9H0P7 198 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 TMEM14CQ9P0S9 112 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 DNAH11Q96DT5 4516 aa13.39□□□□□ -0.27
NDUFA3-213ENST00000484103 MED14OSP0DP75 135 aa13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 FAM3BP58499 235 aaPredicted RBP13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 PYGO2Q9BRQ0 406 aa13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
NDUFA3-213ENST00000484103 TRGV2A0A075B6R0 118 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 ZNF253O75346 499 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 Q6ZQT7 251 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 C6orf223Q8N319 242 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 SCGB1C1Q8TD33 95 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 VGLL1Q99990 258 aa13.37□□□□□ -0.27
NDUFA3-213ENST00000484103 TRGV1A0A0A0MS02 117 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 BORCS7-ASMTA0A0B4J1R7 106 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 EIF3GO75821 320 aaKnown RBP eCLIP13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 GPX1P07203 203 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 LINC00612Q8N6U2 182 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 Q8TAT8 98 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 PRELID1Q9Y255 219 aa13.36□□□□□ -0.27
NDUFA3-213ENST00000484103 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
NDUFA3-213ENST00000484103 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
NDUFA3-213ENST00000484103 PRR9Q5T870 116 aa13.35□□□□□ -0.27
NDUFA3-213ENST00000484103 RXFP4Q8TDU9 374 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms