RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 C11orf52Q96A22 123 aa6.72□□□□□ -1.33
SHROOM4-204ENST00000483955 RARRES2Q99969 163 aa6.72□□□□□ -1.33
SHROOM4-204ENST00000483955 RPH3ALQ9UNE2 315 aa6.72□□□□□ -1.33
SHROOM4-204ENST00000483955 SCO2A0A1W2PP80 73 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 G3V4G9 280 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 CD7P09564 240 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 UBE2G1P62253 170 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 GNG5P63218 68 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 TMEM78Q5T7P6 136 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 GOLT1AQ6ZVE7 132 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 EIF4E3Q8N5X7 224 aaKnown RBP6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 SAV1Q9H4B6 383 aaPredicted RBP6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 WNK1Q9H4A3 2382 aa6.71□□□□□ -1.34
SHROOM4-204ENST00000483955 IGKV2-40A0A087WW87 121 aaPredicted RBP6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 A0A0J9YX75 114 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 IGKV2D-40P01614 121 aaPredicted RBP6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 HLA-DRB4P13762 266 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 HIST1H1AQ02539 215 aaPredicted RBP6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 STHQ8IWL8 128 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 C2CD4CQ8TF44 421 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 FMC1Q96HJ9 113 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 LINC00477Q96M19 166 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 ODF3Q96PU9 254 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 NDFIP1Q9BT67 221 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 SLC35B3Q9H1N7 401 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 C19orf73Q9NVV2 129 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 HLA-DRB4X5D2U9 266 aa6.7□□□□□ -1.34
SHROOM4-204ENST00000483955 TRBV7-9A0A0J9YWB2 115 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 TRBV6-1A0A0K0K1D8 114 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 NPIPB6E9PJ23 425 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 TAS2R60P59551 318 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 TMEM183BQ1AE95 376 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 ACTL10Q5JWF8 245 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 KPRPQ5T749 579 aaPredicted RBP6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 APRG1Q8IVJ8 170 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 PRR25Q96S07 402 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 LENEPQ9Y5L5 61 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 TRRAPQ9Y4A5 3859 aa6.69□□□□□ -1.34
SHROOM4-204ENST00000483955 KNCNA6PVL3 124 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 A8MTW9 85 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 F6UB75 175 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 H3BMM0 161 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 RPL35P42766 123 aaKnown RBP6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF138P52744 262 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 CEBPGP53567 150 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 KRTAP10-11P60412 298 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 NUTF2P61970 127 aaKnown RBP6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 FAM74A3Q4VXF1 159 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 SAPCD1Q5SSQ6 148 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 Q86TA4 180 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 Q8N1Y9 231 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 SMIM12Q96EX1 92 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 PARLQ9H300 379 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF492Q9P255 531 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 KLF12Q9Y4X4 402 aa6.68□□□□□ -1.34
SHROOM4-204ENST00000483955 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 TRAV8-1A0A0A6YYK1 113 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 C9JCJ5 164 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 LTAP01374 205 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 AMBPP02760 352 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 SFTA3P0C7M3 94 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 TSPOP30536 169 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 LEPP41159 167 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 GNG4P50150 75 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 DEFB1P60022 68 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF124Q15973 351 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 SOHLH1Q5JUK2 328 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 MORN3Q6PF18 240 aaPredicted RBP6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 PRNTQ86SH4 94 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 TRPT1Q86TN4 253 aaKnown RBP6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 DEFB125Q8N687 156 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 OR4B1Q8NGF8 309 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 VGLL1Q99990 258 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 SMIM7Q9BQ49 75 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 AGPAT4-IT1Q9H0P7 198 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 WFDC10AQ9H1F0 79 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 SRD5A3Q9H8P0 318 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 ZFP30Q9Y2G7 519 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 CMYA5Q8N3K9 4069 aa6.67□□□□□ -1.34
SHROOM4-204ENST00000483955 LOC102724200A0A096LPH7 203 aaPredicted RBP6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF727A8MUV8 499 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 A8MZ25 164 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 C9JQL5 133 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 IGLV2-11P01706 119 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 ERCC8Q13216 396 aa6.66□□□□□ -1.34
SHROOM4-204ENST00000483955 CENPWQ5EE01 88 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms