RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
SMAD9-204ENST00000483941 BAGE2Q86Y30 109 aa10.48□□□□□ -0.73
SMAD9-204ENST00000483941 LINC00477Q96M19 166 aa10.48□□□□□ -0.73
SMAD9-204ENST00000483941 TENM3Q9P273 2699 aa10.48□□□□□ -0.73
SMAD9-204ENST00000483941 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
SMAD9-204ENST00000483941 RNF182Q8N6D2 247 aa10.47□□□□□ -0.73
SMAD9-204ENST00000483941 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
SMAD9-204ENST00000483941 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
SMAD9-204ENST00000483941 PSG8Q9UQ74 426 aa10.47□□□□□ -0.73
SMAD9-204ENST00000483941 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
SMAD9-204ENST00000483941 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 M0R036 132 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 LTAP01374 205 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 ADCYAP1P18509 176 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 CENPWQ5EE01 88 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 PSMG4Q5JS54 123 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 IGFL4Q6B9Z1 124 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 MRAPQ8TCY5 172 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
SMAD9-204ENST00000483941 ZNF705FA8MVS1 300 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-204ENST00000483941 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 HLA-DMBP28068 263 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 ZNF138P52744 262 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 RHEBQ15382 184 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 PRNTQ86SH4 94 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
SMAD9-204ENST00000483941 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
SMAD9-204ENST00000483941 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 PPP1R2P9O14990 202 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
SMAD9-204ENST00000483941 MT-ND4LP03901 98 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 CT45A10P0DMU9 189 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 ADIRFQ15847 76 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 Q86TA4 180 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 LINC01551Q86U37 167 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 CLRN3Q8NCR9 226 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 C20orf173Q96LM9 149 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 IGF2BP2-AS1Q96M15 143 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 LINC00479Q96M42 142 aa10.44□□□□□ -0.74
SMAD9-204ENST00000483941 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
SMAD9-204ENST00000483941 OR11H12B2RN74 326 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 NPIPB6E9PJ23 425 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 RPL23P62829 140 aaKnown RBP10.43□□□□□ -0.74
SMAD9-204ENST00000483941 HIST1H1AQ02539 215 aaPredicted RBP10.43□□□□□ -0.74
SMAD9-204ENST00000483941 C15orf54Q8N8G6 183 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 OCC1Q8TAD7 63 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 ODF3Q96PU9 254 aa10.43□□□□□ -0.74
SMAD9-204ENST00000483941 SAV1Q9H4B6 383 aaPredicted RBP10.43□□□□□ -0.74
SMAD9-204ENST00000483941 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
SMAD9-204ENST00000483941 TSPOP30536 169 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 DEFB131AP59861 70 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 SMUG1Q53HV7 270 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 COX8CQ7Z4L0 72 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 GTSCR1Q86UQ5 136 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 ANAPC16Q96DE5 110 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
SMAD9-204ENST00000483941 PRR25Q96S07 402 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 VGLL1Q99990 258 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 CTDSP1Q9GZU7 261 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 SELENOKQ9Y6D0 94 aa10.42□□□□□ -0.74
SMAD9-204ENST00000483941 DYNC2H1Q8NCM8 4307 aaKnown RBP10.41□□□□□ -0.74
SMAD9-204ENST00000483941 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 A0A087WWC5 75 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 A0A0J9YX75 114 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 GCGP01275 180 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 LEPP41159 167 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 MAP6D1Q9H9H5 199 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 TMEM242Q9NWH2 141 aa10.41□□□□□ -0.74
SMAD9-204ENST00000483941 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 FAM24BQ8N5W8 94 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 ISOC2Q96AB3 205 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 SGK494Q96LW2 274 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 ASCL2Q99929 193 aa10.4□□□□□ -0.74
SMAD9-204ENST00000483941 C7orf77A4D0Y5 90 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
SMAD9-204ENST00000483941 ERCC8Q13216 396 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 RPS10P5Q9NQ39 176 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 AURKAIP1Q9NWT8 199 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-204ENST00000483941 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
SMAD9-204ENST00000483941 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
SMAD9-204ENST00000483941 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
SMAD9-204ENST00000483941 CRISP2P16562 243 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms