RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 OTOSQ8NHW6 89 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 TVP23CQ96ET8 276 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 Q96M85 177 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 CIB3Q96Q77 187 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-214ENST00000483925 NABP2Q9BQ15 211 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 SPANXDQ9BXN6 97 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 SCN3BQ9NY72 215 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 COA4Q9NYJ1 87 aa2.44□□□□□ -2.02
PTCD3-214ENST00000483925 LSM2Q9Y333 95 aaKnown RBP2.44□□□□□ -2.02
PTCD3-214ENST00000483925 VPS8Q8N3P4 1428 aa2.43□□□□□ -2.02
PTCD3-214ENST00000483925 A0A087WSZ3 146 aa2.43□□□□□ -2.02
PTCD3-214ENST00000483925 M0R2P5 195 aa2.43□□□□□ -2.02
PTCD3-214ENST00000483925 ELOBQ15370 118 aa2.43□□□□□ -2.02
PTCD3-214ENST00000483925 PRO0461Q9UI25 63 aa2.43□□□□□ -2.02
PTCD3-214ENST00000483925 PHLPP1O60346 1717 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 GREB1Q4ZG55 1949 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 ARID1AO14497 2285 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 EML6Q6ZMW3 1958 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 TRAV12-2A0A075B6T6 113 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 TRAV12-1A0A0B4J245 112 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 TCRBV4S1A1TA0A5B7 111 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 ZNF705FA8MVS1 300 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-214ENST00000483925 B4DSR2 109 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 ZNF736B4DX44 427 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-214ENST00000483925 HYPMO75409 117 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 SNAPC5O75971 98 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 HIST1H1DP16402 221 aaKnown RBP2.42□□□□□ -2.02
PTCD3-214ENST00000483925 PPP3R1P63098 170 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 IGFL3Q6UXB1 125 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 SFT2D1Q8WV19 159 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 PSMF1Q92530 271 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 DPH3Q96FX2 82 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 BOKQ9UMX3 212 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-214ENST00000483925 SCRIBQ14160 1630 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 CNTLNQ9NXG0 1405 aa2.42□□□□□ -2.02
PTCD3-214ENST00000483925 TRAV10A0A0B4J240 114 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 IGHV1-24A0A0C4DH33 117 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 LOC100130705A0A1B0GUX0 176 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 A0A1W2PNN7 141 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 IFITM5A6NNB3 132 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 M0R129 80 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 Q6ZUT4 128 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 C9orf163Q8N9P6 203 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 ZNF431Q8TF32 576 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-214ENST00000483925 SMIM7Q9BQ49 75 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 TIMM21Q9BVV7 248 aa2.41□□□□□ -2.02
PTCD3-214ENST00000483925 SCN9AQ15858 1988 aa2.4□□□□□ -2.02
PTCD3-214ENST00000483925 IGKV3D-11A0A0A0MRZ8 115 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 C3orf85A0A1B0GTC6 90 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 CASC2Q6XLA1 102 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 ATP11AUNQ6ZP68 121 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 Q8N2B8 174 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 NAA60Q9H7X0 242 aa2.4□□□□□ -2.03
PTCD3-214ENST00000483925 PRR14LQ5THK1 2151 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 C5orf67F2Z3F1 127 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
PTCD3-214ENST00000483925 IGLV3-19P01714 112 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 TPPP2P59282 170 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 PDE6HQ13956 83 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 DEFB113Q30KQ7 82 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 ATP6V0E2Q8NHE4 81 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 C4orf3Q8WVX3 66 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 ZFP30Q9Y2G7 519 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 RTEL1-TNFRSF6BF6WH68 1400 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 CCDC88AQ3V6T2 1871 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 CDK5RAP2Q96SN8 1893 aa2.39□□□□□ -2.03
PTCD3-214ENST00000483925 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 A6NN06 94 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 J3QLW9 94 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 TNFP01375 233 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 CD2P06729 351 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 GLI3P10071 1580 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 CXCL8P10145 99 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 BRS3P32247 399 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 GTF2H5Q6ZYL4 71 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 SNX29P2Q8IUI4 249 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 C8orf59Q8N0T1 100 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-214ENST00000483925 ACBD7Q8N6N7 88 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 NOP16Q9Y3C1 178 aaKnown RBP2.38□□□□□ -2.03
PTCD3-214ENST00000483925 MYO16Q9Y6X6 1858 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 A2ML1A8K2U0 1454 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 MYOM2P54296 1465 aa2.38□□□□□ -2.03
PTCD3-214ENST00000483925 MALRD1Q5VYJ5 2156 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 LOC107984156A0A0G2JMH3 177 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 C2orf70A6NJV1 201 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 TEX261Q6UWH6 196 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 ZNF833PQ6ZTB9 187 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 ARL17AQ8IVW1 177 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 CLECL1Q8IZS7 167 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 FAM19A2Q8N3H0 131 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 IER3IP1Q9Y5U9 82 aa2.37□□□□□ -2.03
PTCD3-214ENST00000483925 CFTRP13569 1480 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms