RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RGS5O15539 181 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 MPDU1O75352 247 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 HOXB5P09067 269 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 VAMP1P23763 118 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 POLR2GP62487 172 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 CTF1Q16619 201 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 S100A7AQ86SG5 101 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 LRP2P98164 4655 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV3-38A0A0C4DH36 116 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 OR4E1P0C645 316 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 IL18Q14116 193 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 C4orf46Q504U0 113 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 TMEM128Q5BJH2 165 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 PCNPQ8WW12 178 aaKnown RBP7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 PSENENQ9NZ42 101 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 CCDC59Q9P031 241 aaKnown RBP7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 RNF24Q9Y225 148 aa7.19□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV1OR15-1A0A075B7D0 117 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 PIGBOS1A0A0B4J2F0 54 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 GOSR2O14653 212 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 RGS13O14921 159 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 LECT2O14960 151 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 AGPAT2O15120 278 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 CTDSPLO15194 276 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 GPX1P07203 203 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 METTL15P1P0C7V9 234 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 ID3Q02535 119 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 PXDC1Q5TGL8 231 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 IQCF2Q8IXL9 164 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 ZFAND2AQ8N6M9 145 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 OR10P1Q8NGE3 313 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 BLNKQ8WV28 456 aa7.18□□□□□ -1.26
SMARCC1-205ENST00000483847 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 SSSCA1O60232 199 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 ORM1P02763 201 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 CRISP2P16562 243 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 PPP1R1AQ13522 171 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 C10orf113Q5VZT2 155 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 TMEM14EPQ6UXP3 125 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 ZNF546Q86UE3 836 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 OR10G4Q8NGN3 311 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 LINC00477Q96M19 166 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 MGST2Q99735 147 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 ARPC5LQ9BPX5 153 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 TXNDC17Q9BRA2 123 aa7.17□□□□□ -1.26
SMARCC1-205ENST00000483847 C9JCJ5 164 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 FNDC10F2Z333 226 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 NDUFB4O95168 129 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV3-30P01768 117 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 IGHV3-30-5P0DP03 117 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 HNRNPA3P51991 378 aaKnown RBP7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 ARL16Q0P5N6 197 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 GUK1Q16774 197 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 MRPL53Q96EL3 112 aaKnown RBP7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 DIRAS2Q96HU8 199 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 SMIM8Q96KF7 97 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 MGAT4CQ9UBM8 478 aa7.16□□□□□ -1.26
SMARCC1-205ENST00000483847 TRBV19A0A075B6N1 114 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 IGKV2-40A0A087WW87 121 aaPredicted RBP7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 LCE2BO14633 110 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 SFT2D2O95562 160 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 IGKV2D-40P01614 121 aaPredicted RBP7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 PPT1P50897 306 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 MUC21Q5SSG8 566 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 C9orf47Q6ZRZ4 202 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 EXOC3-AS1Q8N2X6 119 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 Q8N3U1 123 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 NHLRC2Q8NBF2 726 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 CIRBP-AS1Q8TBR5 109 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 SOSTQ9BQB4 213 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 SLC25A31Q9H0C2 315 aa7.15□□□□□ -1.26
SMARCC1-205ENST00000483847 ZNF253O75346 499 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 TNXBP22105 4242 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 TIRAPP58753 221 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 RASL10AQ92737 203 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 DNAJC4Q9NNZ3 241 aa7.14□□□□□ -1.27
SMARCC1-205ENST00000483847 IGHV3-16A0A0C4DH30 117 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 NMBP08949 121 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 ZNF846Q147U1 533 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 SPCS2Q15005 226 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 OR10J3Q5JRS4 329 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 MIC13Q5XKP0 118 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 Q8TAT8 98 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 SRRQ9GZT4 340 aa7.13□□□□□ -1.27
SMARCC1-205ENST00000483847 TRAV8-6A0A0B4J262 113 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 PYYP10082 97 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 TNFSF8P32971 234 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 CAMLGP49069 296 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 TMEM78Q5T7P6 136 aa7.12□□□□□ -1.27
SMARCC1-205ENST00000483847 MCFD2Q8NI22 146 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms