RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 RAB2AP61019 212 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 ZNF266Q14584 549 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 TMEM78Q5T7P6 136 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-204ENST00000482519 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
VAMP4-204ENST00000482519 AQP10Q96PS8 301 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 Q9H3A6 140 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
VAMP4-204ENST00000482519 TIMM8BQ9Y5J9 83 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-204ENST00000482519 KMT2AQ03164 3969 aa11.74□□□□□ -0.53
VAMP4-204ENST00000482519 FXYD6-FXYD2A0A087WZ82 144 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 C7orf71A4D174 169 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
VAMP4-204ENST00000482519 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
VAMP4-204ENST00000482519 GPX1P07203 203 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 C9orf47Q6ZRZ4 202 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 OR10G4Q8NGN3 311 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 OR10G9Q8NGN4 311 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 OR10G7Q8NGN6 311 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 RNASE8Q8TDE3 154 aaKnown RBP11.73□□□□□ -0.53
VAMP4-204ENST00000482519 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
VAMP4-204ENST00000482519 F5H768 121 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 CD300CQ08708 224 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 OR2T35Q8NGX2 323 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 FAM210BQ96KR6 192 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
VAMP4-204ENST00000482519 P0DMU3 169 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 FAM231AP0DMU4 169 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 FAM231CP0DMU5 169 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 Q8TAT8 98 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 FAM19A4Q96LR4 140 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 PYGO2Q9BRQ0 406 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 RPH3ALQ9UNE2 315 aa11.71□□□□□ -0.53
VAMP4-204ENST00000482519 CBY3A6NI87 242 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 KLLNB2CW77 178 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 ZNF138P52744 262 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 UBE2DNLQ8IWF7 75 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 ZNF492Q9P255 531 aa11.7□□□□□ -0.54
VAMP4-204ENST00000482519 PGPA6NDG6 321 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 ATP5G1P05496 136 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 ATP5G3P48201 142 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-204ENST00000482519 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 POM121L12Q8N7R1 296 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 RXFP4Q8TDU9 374 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 SH3BGRL3Q9H299 93 aa11.69□□□□□ -0.54
VAMP4-204ENST00000482519 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-204ENST00000482519 GAGE7O76087 117 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 CRISP2P16562 243 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 PRR9Q5T870 116 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 RPL7L1Q6DKI1 246 aaKnown RBP11.68□□□□□ -0.54
VAMP4-204ENST00000482519 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 PSMG3Q9BT73 122 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-204ENST00000482519 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 TNFSF18Q9UNG2 199 aa11.68□□□□□ -0.54
VAMP4-204ENST00000482519 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 RNF222A6NCQ9 220 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 DIRC3C9JPN6 131 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 RGS13O14921 159 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 NMBP08949 121 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 ARL14EPLP0DKL9 152 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 Q6ZQT7 251 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
VAMP4-204ENST00000482519 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 NUDT3O95989 172 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 MBP02144 154 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 OR5I1Q13606 314 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 EIF4E3Q8N5X7 224 aaKnown RBP11.66□□□□□ -0.54
VAMP4-204ENST00000482519 ZNF680Q8NEM1 530 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 RAB24Q969Q5 203 aa11.66□□□□□ -0.54
VAMP4-204ENST00000482519 SMLR1H3BR10 107 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 ARPC5O15511 151 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 SERF2P84101 59 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 GOLT1AQ6ZVE7 132 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 IQCF2Q8IXL9 164 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 GNPNAT1Q96EK6 184 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-204ENST00000482519 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
VAMP4-204ENST00000482519 BIRC6Q9NR09 4857 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 M0R2N4 97 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 GNG5P63218 68 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 Q6ZTI0 123 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
VAMP4-204ENST00000482519 ACTR3CQ9C0K3 210 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms