RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 IBA57Q5T440 356 aaKnown RBP5.03□□□□□ -1.6
USP54-213ENST00000481991 IZUMO2Q6UXV1 221 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 PATE2Q6UY27 113 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 Q6ZQT7 251 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 Q6ZRU5 148 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 OR51S1Q8NGJ8 323 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 LINC00477Q96M19 166 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
USP54-213ENST00000481991 VCX3BQ9H321 246 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 SHPKQ9UHJ6 478 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 GPR132Q9UNW8 380 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 STRAPQ9Y3F4 350 aaKnown RBP5.03□□□□□ -1.6
USP54-213ENST00000481991 PXMP4Q9Y6I8 212 aa5.03□□□□□ -1.6
USP54-213ENST00000481991 IGKV2D-24A0A075B6R9 120 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 FABP12A6NFH5 140 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 GGTLC3B5MD39 225 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 H3BQ15 152 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 COX7A2P2O60397 106 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 PFN1P07737 140 aaKnown RBP5.02□□□□□ -1.61
USP54-213ENST00000481991 SELENOTP62341 195 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 FAM122CQ6P4D5 195 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 IQCF2Q8IXL9 164 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 ATP6V0E2Q8NHE4 81 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 MTFP1Q9UDX5 166 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 RPH3ALQ9UNE2 315 aa5.02□□□□□ -1.61
USP54-213ENST00000481991 A0A0D9SG52 128 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 MRPS12O15235 138 aaKnown RBP5.01□□□□□ -1.61
USP54-213ENST00000481991 SYNGR2O43760 224 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 PITX3O75364 302 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 VWC2Q2TAL6 325 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 MZT2AQ6P582 158 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 DAZ4Q86SG3 579 aaKnown RBP5.01□□□□□ -1.61
USP54-213ENST00000481991 CLVS1Q8IUQ0 354 aaPredicted RBP5.01□□□□□ -1.61
USP54-213ENST00000481991 HSD17B11Q8NBQ5 300 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 OR10G4Q8NGN3 311 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 RAB2BQ8WUD1 216 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 ODF3Q96PU9 254 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 SRRQ9GZT4 340 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 DAZ3Q9NR90 486 aaKnown RBP5.01□□□□□ -1.61
USP54-213ENST00000481991 PSENENQ9NZ42 101 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 EXTL2Q9UBQ6 330 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 TIMM9Q9Y5J7 89 aa5.01□□□□□ -1.61
USP54-213ENST00000481991 TRAV8-1A0A0A6YYK1 113 aa5□□□□□ -1.61
USP54-213ENST00000481991 IGHV3-73A0A0B4J1V6 119 aa5□□□□□ -1.61
USP54-213ENST00000481991 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
USP54-213ENST00000481991 RNF222A6NCQ9 220 aa5□□□□□ -1.61
USP54-213ENST00000481991 M0R3E3 92 aa5□□□□□ -1.61
USP54-213ENST00000481991 AGPAT2O15120 278 aa5□□□□□ -1.61
USP54-213ENST00000481991 PLP1P60201 277 aa5□□□□□ -1.61
USP54-213ENST00000481991 SLC38A11Q08AI6 406 aa5□□□□□ -1.61
USP54-213ENST00000481991 SURF2Q15527 256 aaPredicted RBP5□□□□□ -1.61
USP54-213ENST00000481991 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
USP54-213ENST00000481991 TOR2AQ5JU69 321 aa5□□□□□ -1.61
USP54-213ENST00000481991 TMEM78Q5T7P6 136 aa5□□□□□ -1.61
USP54-213ENST00000481991 LELP1Q5T871 98 aa5□□□□□ -1.61
USP54-213ENST00000481991 C10orf113Q5VZT2 155 aa5□□□□□ -1.61
USP54-213ENST00000481991 TMEM183AQ8IXX5 376 aa5□□□□□ -1.61
USP54-213ENST00000481991 Q8N3U1 123 aa5□□□□□ -1.61
USP54-213ENST00000481991 RMI2Q96E14 147 aa5□□□□□ -1.61
USP54-213ENST00000481991 SCGB3A2Q96PL1 93 aa5□□□□□ -1.61
USP54-213ENST00000481991 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
USP54-213ENST00000481991 NPVFQ9HCQ7 196 aa5□□□□□ -1.61
USP54-213ENST00000481991 MCUBQ9NWR8 336 aa5□□□□□ -1.61
USP54-213ENST00000481991 CCDC59Q9P031 241 aaKnown RBP5□□□□□ -1.61
USP54-213ENST00000481991 MGAT4CQ9UBM8 478 aa5□□□□□ -1.61
USP54-213ENST00000481991 NAGKQ9UJ70 344 aa5□□□□□ -1.61
USP54-213ENST00000481991 COX11Q9Y6N1 276 aa5□□□□□ -1.61
USP54-213ENST00000481991 IGKV2-40A0A087WW87 121 aaPredicted RBP4.99□□□□□ -1.61
USP54-213ENST00000481991 TRAV4A0A0B4J268 109 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 KLLNB2CW77 178 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 PRSS46E5RG02 174 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 IGKV2D-40P01614 121 aaPredicted RBP4.99□□□□□ -1.61
USP54-213ENST00000481991 HOXB5P09067 269 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 AKAIN1P0CW23 69 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 HIST1H1EP10412 219 aaKnown RBP4.99□□□□□ -1.61
USP54-213ENST00000481991 SRPXP78539 464 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 LAGE3Q14657 143 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 RASL10AQ92737 203 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 YIPF6Q96EC8 236 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 SAT2Q96F10 170 aaPredicted RBP4.99□□□□□ -1.61
USP54-213ENST00000481991 PRRT1Q99946 306 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 SPXQ9BT56 116 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 PAXXQ9BUH6 204 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 SCP2D1Q9UJQ7 156 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 URGCP-MRPS24S4R325 110 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
USP54-213ENST00000481991 METTL15P1P0C7V9 234 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 VAMP1P23763 118 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 TIRAPP58753 221 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 VBP1P61758 197 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 GUK1Q16774 197 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 PRR9Q5T870 116 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 PXDC1Q5TGL8 231 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 FAM159AQ6UWV7 190 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 Q6ZRG5 221 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 EXOC3-AS1Q8N2X6 119 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 C15orf40Q8WUR7 153 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 C2orf50Q96LR7 162 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms