RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
RXRA-202ENST00000481739 PSMB8P28062 276 aa12.08□□□□□ -0.48
RXRA-202ENST00000481739 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
RXRA-202ENST00000481739 TMEM95Q3KNT9 176 aa12.08□□□□□ -0.48
RXRA-202ENST00000481739 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
RXRA-202ENST00000481739 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 DNAJC9-AS1A6NH13 148 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 A8MWP6 167 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 HAX1O00165 279 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 FOSL1P15407 271 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
RXRA-202ENST00000481739 JOSD1Q15040 202 aaPredicted RBP12.07□□□□□ -0.48
RXRA-202ENST00000481739 KLK15Q9H2R5 256 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 PPP1R14DQ9NXH3 145 aa12.07□□□□□ -0.48
RXRA-202ENST00000481739 HIVEP1P15822 2718 aa12.06□□□□□ -0.48
RXRA-202ENST00000481739 APOHP02749 345 aaPredicted RBP12.06□□□□□ -0.48
RXRA-202ENST00000481739 SLAQ13239 276 aa12.06□□□□□ -0.48
RXRA-202ENST00000481739 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
RXRA-202ENST00000481739 PGLYRP4Q96LB8 373 aa12.06□□□□□ -0.48
RXRA-202ENST00000481739 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
RXRA-202ENST00000481739 A0A1B0GUT8 65 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 PCP4L1A6NKN8 68 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 K7EMT4 169 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 SERF1AO75920 110 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 SRIP30626 198 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 CAMPP49913 170 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 CRIP1P50238 77 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 RIGQ13278 110 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 SAMD13Q5VXD3 122 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 ZNF418Q8TF45 676 aaPredicted RBP12.05□□□□□ -0.48
RXRA-202ENST00000481739 C8orf49Q96NF6 230 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
RXRA-202ENST00000481739 TP53TG3Q9ULZ0 132 aa12.05□□□□□ -0.48
RXRA-202ENST00000481739 IGHV3-66A0A0C4DH42 116 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 TMEM189A5PLL7 270 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 ELANEP08246 267 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 KLF5Q13887 457 aaPredicted RBP12.04□□□□□ -0.48
RXRA-202ENST00000481739 FAM106AQ4KMX7 169 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 VGLL1Q99990 258 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 ZNF702PQ9H963 129 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
RXRA-202ENST00000481739 SH2D1AO60880 128 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 FOXE3Q13461 319 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 GPHB5Q86YW7 130 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 ESM1Q9NQ30 184 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
RXRA-202ENST00000481739 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 FAM181BA6NEQ2 426 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 HLA-DMBP28068 263 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 KIAA1644Q3SXP7 199 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 GDF5OSQ5U4N7 250 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 C16orf92Q96LL3 132 aa12.03□□□□□ -0.48
RXRA-202ENST00000481739 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 IGHV7-4-1A0A0J9YVY3 117 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.48
RXRA-202ENST00000481739 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 ASCL2Q99929 193 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.48
RXRA-202ENST00000481739 IGHV3-49A0A0A0MS15 119 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 ZNF138P52744 262 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 LINC00310P59036 64 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 RNF182Q8N6D2 247 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.49
RXRA-202ENST00000481739 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 GSN-AS1Q9NRJ2 163 aa12.02□□□□□ -0.49
RXRA-202ENST00000481739 A0A1B0GUS0 222 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 GZMBP10144 247 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 Q8N2B8 174 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 Q8TAT8 98 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 MYOZ3Q8TDC0 251 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
RXRA-202ENST00000481739 NUPR1O60356 82 aa12□□□□□ -0.49
RXRA-202ENST00000481739 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
RXRA-202ENST00000481739 LCNL1Q6ZST4 164 aa12□□□□□ -0.49
RXRA-202ENST00000481739 PRAC2D3DTV9 90 aa12□□□□□ -0.49
RXRA-202ENST00000481739 OVOL1O14753 267 aa12□□□□□ -0.49
RXRA-202ENST00000481739 LINC01559Q495D7 138 aa12□□□□□ -0.49
RXRA-202ENST00000481739 SSBP4Q9BWG4 385 aaPredicted RBP12□□□□□ -0.49
RXRA-202ENST00000481739 RHPN1-AS1Q9BWJ2 59 aa12□□□□□ -0.49
RXRA-202ENST00000481739 SMPXQ9UHP9 88 aa12□□□□□ -0.49
RXRA-202ENST00000481739 NF1P21359 2839 aa11.99□□□□□ -0.49
RXRA-202ENST00000481739 SOCS3O14543 225 aa11.99□□□□□ -0.49
RXRA-202ENST00000481739 CTRLP40313 264 aa11.99□□□□□ -0.49
RXRA-202ENST00000481739 ZNF493Q6ZR52 646 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms