RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 SUN5Q8TC36 379 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 C18orf15Q96N68 181 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 SCRT1Q9BWW7 348 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 MED28Q9H204 178 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 KLK5Q9Y337 293 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-213ENST00000480102 RFNGQ9Y644 331 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 LCE6AA0A183 80 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 LYRM9A8MSI8 78 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 HMSDA8MTL9 139 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 BOLA2-SMG1P6H3BVE0 249 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 H7BYZ3 331 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 IFNA5P01569 189 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 CRISP2P16562 243 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 M6PRP20645 277 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 C4BPBP20851 252 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 FGF7P21781 194 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 CDKN1BP46527 198 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 TFPI2P48307 235 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 CNN1P51911 297 aaKnown RBP3.52□□□□□ -1.85
PTCD3-213ENST00000480102 TAS2R60P59551 318 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 FAM78BQ5VT40 261 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 MIC13Q5XKP0 118 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 C9orf47Q6ZRZ4 202 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 OR11H7Q8NGC8 314 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 RXFP4Q8TDU9 374 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 RPL36ALQ969Q0 106 aaKnown RBP3.52□□□□□ -1.85
PTCD3-213ENST00000480102 RPUSD4Q96CM3 377 aaKnown RBP3.52□□□□□ -1.85
PTCD3-213ENST00000480102 GNPNAT1Q96EK6 184 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-213ENST00000480102 FAM167A-AS1Q96KT0 104 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 LINC00477Q96M19 166 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 UHRF2Q96PU4 802 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 TCEAL7Q9BRU2 100 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 NKX6-2Q9C056 277 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-213ENST00000480102 SLC25A22Q9H936 323 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 TNFSF18Q9UNG2 199 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 FUT9Q9Y231 359 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 GOLT1BQ9Y3E0 138 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 ARL2-SNX15V9GYD0 113 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 STARD9Q9P2P6 4700 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
PTCD3-213ENST00000480102 IGKV3-7A0A075B6H7 116 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 TRAV34A0A0B4J273 112 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 A0A0J9YWU9 116 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 UBE2L5PA0A1B0GUS4 154 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 RNF222A6NCQ9 220 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 KNCNA6PVL3 124 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 KLLNB2CW77 178 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 H3BNG1 76 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 H3BQ15 152 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 CRXO43186 299 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-213ENST00000480102 NDUFB4O95168 129 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 INSP01308 110 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 HBE1P02100 147 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 NBEAP1P0C6P0 100 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 RPL35AP18077 110 aaKnown RBP3.51□□□□□ -1.85
PTCD3-213ENST00000480102 RHOBP62745 196 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 FCN2Q15485 313 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 ANXA2RQ3ZCQ2 193 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 KHDC3LQ587J8 217 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 GDF5OSQ5U4N7 250 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 C1orf158Q8N1D5 194 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 INO80EQ8NBZ0 244 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-213ENST00000480102 C11orf45Q8TAV5 145 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 SCGB1C1Q8TD33 95 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 FXYD5Q96DB9 178 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 PYGO2Q9BRQ0 406 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 NDUFAF3Q9BU61 184 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 OR51M1Q9H341 326 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 AAMDCQ9H7C9 122 aa3.51□□□□□ -1.85
PTCD3-213ENST00000480102 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 IGHV4-28A0A0C4DH34 117 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 G3V3Q6 166 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 SIX6O95475 246 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 STAG3L2P0CL84 134 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 STAG3L3P0CL85 134 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RBMY1A1P0DJD3 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RBMY1CP0DJD4 496 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 LEPP41159 167 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 DAZ2Q13117 558 aaKnown RBP3.5□□□□□ -1.85
PTCD3-213ENST00000480102 CLINT1Q14677 625 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RBMY1FQ15415 496 aaKnown RBP3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RRN3P1Q2M238 152 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 ACOT6Q3I5F7 207 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-213ENST00000480102 TDRG1Q3Y452 100 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 LRRC37A5PQ49AS3 106 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 FAM74A1Q5RGS3 127 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 LGALS9CQ6DKI2 356 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 DPPA3Q6W0C5 159 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 COX8CQ7Z4L0 72 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF738Q8NE65 137 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF680Q8NEM1 530 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 OR2T35Q8NGX2 323 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 OR10J6PQ8NGY7 276 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms