RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 ERCC8Q13216 396 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 PRR9Q5T870 116 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 LINC00305Q7Z4B0 112 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 CLVS1Q8IUQ0 354 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-211ENST00000479625 PCNPQ8WW12 178 aaKnown RBP6.4□□□□□ -1.38
GPNMB-211ENST00000479625 ZNF479Q96JC4 524 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 MRPL32Q9BYC8 188 aaKnown RBP6.4□□□□□ -1.38
GPNMB-211ENST00000479625 IGHV3-38A0A0C4DH36 116 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 KLLNB2CW77 178 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 H3BQ15 152 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 M0R3E3 92 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 MED6O75586 246 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV3-30P01768 117 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV3-33P01772 117 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV3-30-3P0DP02 117 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV3-30-5P0DP03 117 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
GPNMB-211ENST00000479625 SLAQ13239 276 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 IBA57Q5T440 356 aaKnown RBP6.39□□□□□ -1.39
GPNMB-211ENST00000479625 MZT2AQ6P582 158 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 SAT2Q96F10 170 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-211ENST00000479625 CIB3Q96Q77 187 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-211ENST00000479625 PRRT1Q99946 306 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 MIXL1Q9H2W2 232 aa6.39□□□□□ -1.39
GPNMB-211ENST00000479625 STRAPQ9Y3F4 350 aaKnown RBP6.39□□□□□ -1.39
GPNMB-211ENST00000479625 TRAV5A0A0B4J249 113 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 MPDU1O75352 247 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 IGLV2-8P01709 118 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 OR4E1P0C645 316 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 ANXA3P12429 323 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 SELENOTP62341 195 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 RPP30P78346 268 aaKnown RBP6.38□□□□□ -1.39
GPNMB-211ENST00000479625 SRPXP78539 464 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 SSBP1Q04837 148 aaKnown RBP6.38□□□□□ -1.39
GPNMB-211ENST00000479625 OPCMLQ14982 345 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 LINC01556Q5JQF7 62 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 BPIFA4PQ86YQ2 179 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 CIRBP-AS1Q8TBR5 109 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 BLNKQ8WV28 456 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 SMIM4Q8WVI0 70 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 FUNDC2Q9BWH2 189 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 Q9H521 79 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 PXMP4Q9Y6I8 212 aa6.38□□□□□ -1.39
GPNMB-211ENST00000479625 DUXBA0A1W2PPF3 345 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 RS1O15537 224 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 PPT1P50897 306 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 OR10P1Q8NGE3 313 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 TMEM37Q8WXS4 190 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 DAZAP1Q96EP5 407 aaKnown RBP6.37□□□□□ -1.39
GPNMB-211ENST00000479625 FAM19A4Q96LR4 140 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 ARPC5LQ9BPX5 153 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 TXNDC17Q9BRA2 123 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV1OR15-1A0A075B7D0 117 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 ANKRD20A5PA0PJZ0 165 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 C9JCJ5 164 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 K7EPK0 472 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 COX7A2P2O60397 106 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 ORM1P02763 201 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 GPX1P07203 203 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 HOXB5P09067 269 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 ASIPP42127 132 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 POLR2GP62487 172 aaKnown RBP eCLIP6.36□□□□□ -1.39
GPNMB-211ENST00000479625 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 NHLRC2Q8NBF2 726 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 OR10G4Q8NGN3 311 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 AP3S1Q92572 193 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 SLC25A31Q9H0C2 315 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 AGPAT4-IT1Q9H0P7 198 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 MCUBQ9NWR8 336 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 CCDC59Q9P031 241 aaKnown RBP6.36□□□□□ -1.39
GPNMB-211ENST00000479625 RABL2BQ9UNT1 228 aa6.36□□□□□ -1.39
GPNMB-211ENST00000479625 IGKV2-40A0A087WW87 121 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-211ENST00000479625 IGKV2D-40P01614 121 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-211ENST00000479625 METTL15P1P0C7V9 234 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 SLC25A6P12236 298 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 RPL37AP61513 92 aaKnown RBP6.35□□□□□ -1.39
GPNMB-211ENST00000479625 MRPS10P82664 201 aaKnown RBP6.35□□□□□ -1.39
GPNMB-211ENST00000479625 ZNF846Q147U1 533 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 OR10J3Q5JRS4 329 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 MUC21Q5SSG8 566 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 ZNF546Q86UE3 836 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 ZFAND2AQ8N6M9 145 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 C15orf40Q8WUR7 153 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 NAA50Q9GZZ1 169 aaKnown RBP6.35□□□□□ -1.39
GPNMB-211ENST00000479625 PSENENQ9NZ42 101 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 SCP2D1Q9UJQ7 156 aa6.35□□□□□ -1.39
GPNMB-211ENST00000479625 IGHV3-16A0A0C4DH30 117 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 GOSR2O14653 212 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 AGPAT2O15120 278 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 RGS5O15539 181 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 SSSCA1O60232 199 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 CRISP2P16562 243 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 C10orf113Q5VZT2 155 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms