RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 ZNF738Q8NE65 137 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 FAM213BQ8TBF2 198 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 C11orf52Q96A22 123 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 LINC00467Q9BRT7 94 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 ATG101Q9BSB4 218 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 CSTL1Q9H114 145 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 TUBA4BQ9H853 241 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
DDX56-211ENST00000479602 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 IGKV3-7A0A075B6H7 116 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 ZNF705EA8MWA4 302 aaPredicted RBP6.49□□□□□ -1.37
DDX56-211ENST00000479602 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 TCRAP04437 139 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 S100A9P06702 114 aaKnown RBP6.49□□□□□ -1.37
DDX56-211ENST00000479602 TSPOP30536 169 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 TFPI2P48307 235 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 ICAM4Q14773 271 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 ZNF705AQ6ZN79 300 aaPredicted RBP6.49□□□□□ -1.37
DDX56-211ENST00000479602 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 CYB561D1Q8N8Q1 229 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 ZNF680Q8NEM1 530 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 OR10J6PQ8NGY7 276 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 SFT2D1Q8WV19 159 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 OVOL2Q9BRP0 275 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 WFDC10AQ9H1F0 79 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 AGRNO00468 2067 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
DDX56-211ENST00000479602 DNAH2Q9P225 4427 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 ZNF705FA8MVS1 300 aaPredicted RBP6.48□□□□□ -1.37
DDX56-211ENST00000479602 K7EQM0 130 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 M0R3E3 92 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 IFNA1P01562 189 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 ZNF705DP0CH99 300 aaPredicted RBP6.48□□□□□ -1.37
DDX56-211ENST00000479602 ZNF705BP0CI00 300 aaPredicted RBP6.48□□□□□ -1.37
DDX56-211ENST00000479602 RANP62826 216 aaKnown RBP6.48□□□□□ -1.37
DDX56-211ENST00000479602 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 GDF5OSQ5U4N7 250 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 ALKAL2Q6UX46 152 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 RNF183Q96D59 192 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 IGF2BP2-AS1Q96M15 143 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 C11orf68Q9H3H3 251 aaKnown RBP6.48□□□□□ -1.37
DDX56-211ENST00000479602 ZNF492Q9P255 531 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 TP53TG3Q9ULZ0 132 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 EPDR1Q9UM22 224 aa6.48□□□□□ -1.37
DDX56-211ENST00000479602 PGPA6NDG6 321 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 F6UZH7 168 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 TMEM250H0YL14 139 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 RGS13O14921 159 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 CRXO43186 299 aaPredicted RBP6.47□□□□□ -1.37
DDX56-211ENST00000479602 PDE6DO43924 150 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 BCL2P10415 239 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 S100A1P23297 94 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 LEPP41159 167 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 CDKN1BP46527 198 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 ZNF138P52744 262 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 MEF2BQ02080 365 aaPredicted RBP6.47□□□□□ -1.37
DDX56-211ENST00000479602 TMEM78Q5T7P6 136 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 EXOC3-AS1Q8N2X6 119 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 CMTM2Q8TAZ6 248 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 C2CD4CQ8TF44 421 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 BLNKQ8WV28 456 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 LINC00052Q96N35 136 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 BOLA1Q9Y3E2 137 aa6.47□□□□□ -1.37
DDX56-211ENST00000479602 YTHDF2Q9Y5A9 579 aaKnown RBP6.47□□□□□ -1.37
DDX56-211ENST00000479602 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 PRAC2D3DTV9 90 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 IGLV2-11P01706 119 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 SUMO1P63165 101 aaKnown RBP6.46□□□□□ -1.38
DDX56-211ENST00000479602 ZNF124Q15973 351 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 TDRG1Q3Y452 100 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 SAPCD1Q5SSQ6 148 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 Q6AWC8 147 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 FMC1Q96HJ9 113 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 AGPAT4-IT1Q9H0P7 198 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 MED9Q9NWA0 146 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 VAX2Q9UIW0 290 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
DDX56-211ENST00000479602 F6UB75 175 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 H3BTX0 84 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 PEX7O00628 323 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 HMGB3O15347 200 aaKnown RBP6.45□□□□□ -1.38
DDX56-211ENST00000479602 CA1P00915 261 aaPredicted RBP6.45□□□□□ -1.38
DDX56-211ENST00000479602 INSP01308 110 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 LTAP01374 205 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 MIFP14174 115 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 FGF8P55075 233 aaPredicted RBP6.45□□□□□ -1.38
DDX56-211ENST00000479602 HIST1H1AQ02539 215 aaPredicted RBP6.45□□□□□ -1.38
DDX56-211ENST00000479602 TMEM183BQ1AE95 376 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 ZNF506Q5JVG8 444 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 ZFAND2AQ8N6M9 145 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms