RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 ATG101Q9BSB4 218 aa6.5□□□□□ -1.37
CMTM1-208ENST00000479381 TRBV19A0A075B6N1 114 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 M0R3E3 92 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 CRXO43186 299 aaPredicted RBP6.49□□□□□ -1.37
CMTM1-208ENST00000479381 NUDT3O95989 172 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 ERCC8Q13216 396 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 ACOT6Q3I5F7 207 aaPredicted RBP6.49□□□□□ -1.37
CMTM1-208ENST00000479381 KHDC3LQ587J8 217 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 GFI1BQ5VTD9 330 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 IQCF2Q8IXL9 164 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 ARPC5LQ9BPX5 153 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 SLC25A2Q9BXI2 301 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 NOP10Q9NPE3 64 aaKnown RBP6.49□□□□□ -1.37
CMTM1-208ENST00000479381 TMEM14CQ9P0S9 112 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 FUT9Q9Y231 359 aa6.49□□□□□ -1.37
CMTM1-208ENST00000479381 TIMM8BQ9Y5J9 83 aaPredicted RBP6.49□□□□□ -1.37
CMTM1-208ENST00000479381 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
CMTM1-208ENST00000479381 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
CMTM1-208ENST00000479381 CBY3A6NI87 242 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 A8MTW9 85 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 ZNF253O75346 499 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
CMTM1-208ENST00000479381 ATP5G1P05496 136 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 GPX1P07203 203 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 NBEAP1P0C6P0 100 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 ATP5G3P48201 142 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 PDE6HQ13956 83 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 FCN2Q15485 313 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 TMEM88Q6PEY1 159 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
CMTM1-208ENST00000479381 MRPL53Q96EL3 112 aaKnown RBP6.48□□□□□ -1.37
CMTM1-208ENST00000479381 HYLS1Q96M11 299 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 C20orf144Q9BQM9 153 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
CMTM1-208ENST00000479381 IGLV2-18A0A075B6J9 118 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 FXYD6-FXYD2A0A087WZ82 144 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 C7orf71A4D174 169 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 M0R2N4 97 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 CT45A10P0DMU9 189 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 AZU1P20160 251 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
CMTM1-208ENST00000479381 RANP62826 216 aaKnown RBP6.47□□□□□ -1.37
CMTM1-208ENST00000479381 OR5I1Q13606 314 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 ZNF266Q14584 549 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 AKAP14Q86UN6 197 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 HSD17B11Q8NBQ5 300 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 INO80EQ8NBZ0 244 aaPredicted RBP6.47□□□□□ -1.37
CMTM1-208ENST00000479381 SAT2Q96F10 170 aaPredicted RBP6.47□□□□□ -1.37
CMTM1-208ENST00000479381 LINC00477Q96M19 166 aa6.47□□□□□ -1.37
CMTM1-208ENST00000479381 GAGE12BA1L429 117 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 NPIPB6E9PJ23 425 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 HMGB3O15347 200 aaKnown RBP6.46□□□□□ -1.38
CMTM1-208ENST00000479381 EIF3GO75821 320 aaKnown RBP eCLIP6.46□□□□□ -1.38
CMTM1-208ENST00000479381 GAGE7O76087 117 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 SLC25A5P05141 298 aaKnown RBP6.46□□□□□ -1.38
CMTM1-208ENST00000479381 GAGE12FP0CL80 117 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 GAGE12GP0CL81 117 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 GAGE12IP0CL82 117 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 BTN1A1Q13410 526 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 KIR3DS1Q14943 382 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 C15orf53Q8NAA6 179 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 OR10G4Q8NGN3 311 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 OR10G9Q8NGN4 311 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 OR10G7Q8NGN6 311 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 ASB13Q8WXK3 278 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 PHYHIPLQ96FC7 376 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 KRTAP4-12Q9BQ66 201 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 Q9H3A6 140 aa6.46□□□□□ -1.38
CMTM1-208ENST00000479381 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 NDUFB4O95168 129 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 M6PRP20645 277 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
CMTM1-208ENST00000479381 RAB2AP61019 212 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 ZNF680Q8NEM1 530 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 Q8TAT8 98 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
CMTM1-208ENST00000479381 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 A0A0J9YY99 117 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 PGPA6NDG6 321 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 ZNF138P52744 262 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
CMTM1-208ENST00000479381 RXFP4Q8TDU9 374 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 FAM167A-AS1Q96KT0 104 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 VGLL1Q99990 258 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
CMTM1-208ENST00000479381 AGPAT4-IT1Q9H0P7 198 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms