RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 OR51T1Q8NGJ9 327 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OR4A4PQ8NGN8 299 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OR13C9Q8NGT0 318 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM234Q8WY98 164 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 CMBLQ96DG6 245 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 C14orf144Q96I85 54 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF681Q96N22 645 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 GINS3Q9BRX5 216 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 C20orf24Q9BUV8 137 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 SCRT1Q9BWW7 348 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 SLC25A2Q9BXI2 301 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 SMIM3Q9BZL3 60 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 PARP12Q9H0J9 701 aaKnown RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TUBG2Q9NRH3 451 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM242Q9NWH2 141 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 DOK5Q9P104 306 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 NAGKQ9UJ70 344 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 GOLT1BQ9Y3E0 138 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF850A8MQ14 1090 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 OVOL1O14753 267 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 NDUFS6O75380 124 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 MRPL33O75394 65 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 VAMP5O95183 116 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 CYB5R3P00387 301 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 HLA-HP01893 362 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 ARG1P05089 322 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 LINC00614P0C842 121 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 PGA3P0DJD8 388 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 NPY1RP25929 384 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 CEACAM6P40199 344 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 RAB9AP51151 201 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 POLR2HP52434 150 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 TAS2R30P59541 319 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 HBG1P69891 147 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 HBG2P69892 147 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 RPL18Q07020 188 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 SKP2Q13309 424 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 JOSD1Q15040 202 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 OR8G1Q15617 311 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 COL5A1-AS1Q5SY13 56 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 RNASEKQ6P5S7 137 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 GLIPR1L1Q6UWM5 242 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 FBXW12Q6X9E4 464 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 SSX7Q7RTT5 188 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 SMIM15Q7Z3B0 74 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 SELENOHQ8IZQ5 122 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 HIST3H2BBQ8N257 126 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 DEFB125Q8N687 156 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 OR11H1Q8NG94 326 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 OR4C5Q8NGB2 326 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 LYPD6BQ8NI32 183 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 RNASEH2CQ8TDP1 164 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 DTD1Q8TEA8 209 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 ISOC2Q96AB3 205 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 ACTR3CQ9C0K3 210 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 PRO1933Q9H354 126 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 TXNIPQ9H3M7 391 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 GAL3ST2Q9H3Q3 398 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 GEMIN7Q9H840 131 aaKnown RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF355PQ9NSJ1 428 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 LYRM2Q9NU23 88 aaPredicted RBP2.8□□□□□ -1.96
CCDC171-207ENST00000478913 OR5AC2Q9NZP5 309 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 VAX2Q9UIW0 290 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 HDGFL3Q9Y3E1 203 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 TANC2Q9HCD6 1990 aa2.8□□□□□ -1.96
CCDC171-207ENST00000478913 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 DUXBA0A1W2PPF3 345 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF705FA8MVS1 300 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 H7BYZ3 331 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 GEMIN2O14893 280 aaKnown RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BKO60814 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 PITX3O75364 302 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 CDS2O95674 445 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BJP06899 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF705DP0CH99 300 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF705BP0CI00 300 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BOP23527 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 BLVRBP30043 206 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BBP33778 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 CD200P41217 278 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 PSMB3P49720 205 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 GNG10P50151 68 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 KLF3P57682 345 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BDP58876 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 TPPP2P59282 170 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 UBE2G2P60604 165 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 RPS23P62266 143 aaKnown RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H2BCP62807 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 GRB2P62993 217 aaKnown RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 PAFAH1B2P68402 229 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 SYCNQ0VAF6 134 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 ENDOGQ14249 297 aaKnown RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST2H2BEQ16778 126 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM241Q24JQ0 296 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM176BQ3YBM2 270 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 PYY3Q5JQD4 70 aa2.79□□□□□ -1.96
CCDC171-207ENST00000478913 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.79□□□□□ -1.96
CCDC171-207ENST00000478913 LINC01590Q5TEZ4 76 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms