RNA–Protein interactions for RNA: ENST00000478688.1

UBA7-205, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-205	ENST00000478688	RPH3AL	Q9UNE2	315 aa		11.22	□□□□□ -0.61
UBA7-205	ENST00000478688	ATP6V0C	P27449	155 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	LGALS9C	Q6DKI2	356 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	CCDC28A	Q8IWP9	274 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	C16orf74	Q96GX8	76 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	HYLS1	Q96M11	299 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	LINC00477	Q96M19	166 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	VGLL1	Q99990	258 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	C20orf144	Q9BQM9	153 aa		11.21	□□□□□ -0.61
UBA7-205	ENST00000478688	C7orf71	A4D174	169 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	RNF222	A6NCQ9	220 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	LYRM9	A8MSI8	78 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	RNASE4	P34096	147 aa	Known RBP	11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	CDC34	P49427	236 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	BTN1A1	Q13410	526 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	NDUFAF3	Q9BU61	184 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	SH3BGRL3	Q9H299	93 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	TNFSF18	Q9UNG2	199 aa		11.2	□□□□□ -0.62
UBA7-205	ENST00000478688	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	SMLR1	H3BR10	107 aa		11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	SLC25A5	P05141	298 aa	Known RBP	11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	GPX1	P07203	203 aa		11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	RPL7L1	Q6DKI1	246 aa	Known RBP	11.19	□□□□□ -0.62
UBA7-205	ENST00000478688		Q8TAT8	98 aa		11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	TMEM263	Q8WUH6	116 aa	Known RBP	11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	NOP10	Q9NPE3	64 aa	Known RBP	11.19	□□□□□ -0.62
UBA7-205	ENST00000478688	PLAC8L1	A1L4L8	177 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	CD300C	Q08708	224 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	PQLC2	Q6ZP29	291 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	ZNF493	Q6ZR52	646 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	C9orf47	Q6ZRZ4	202 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	LYPD1	Q8N2G4	141 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	OR2G3	Q8NGZ4	309 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	CMTM2	Q8TAZ6	248 aa		11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	PSMG3	Q9BT73	122 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA7-205	ENST00000478688	PGP	A6NDG6	321 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	SNURFL	B1AK76	121 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	ARPC5	O15511	151 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	ARL14EPL	P0DKL9	152 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	ZNF138	P52744	262 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	FAM74A1	Q5RGS3	127 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	IQCF2	Q8IXL9	164 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	RNASE8	Q8TDE3	154 aa	Known RBP	11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	OTOR	Q9NRC9	128 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	ZNF492	Q9P255	531 aa		11.17	□□□□□ -0.62
UBA7-205	ENST00000478688	MB	P02144	154 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	PRR9	Q5T870	116 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	RXFP4	Q8TDU9	374 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	RAB24	Q969Q5	203 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	FAM19A4	Q96LR4	140 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	PYGO2	Q9BRQ0	406 aa		11.16	□□□□□ -0.62
UBA7-205	ENST00000478688	CBY3	A6NI87	242 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	KLLN	B2CW77	178 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	DIRC3	C9JPN6	131 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688		F5H768	121 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688		G3V3Q6	166 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	SERF2	P84101	59 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	TMEM88	Q6PEY1	159 aa		11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA7-205	ENST00000478688	RBAKDN	A6NC62	111 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	RGS13	O14921	159 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	ATP5G1	P05496	136 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	STAG3L2	P0CL84	134 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	STAG3L3	P0CL85	134 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	CRISP2	P16562	243 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	ATP5G3	P48201	142 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	GNG5	P63218	68 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	GOLT1A	Q6ZVE7	132 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	UBE2DNL	Q8IWF7	75 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	ZFAND2A	Q8N6M9	145 aa		11.14	□□□□□ -0.63
UBA7-205	ENST00000478688	GAGE12B	A1L429	117 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	ZNF324	O75467	553 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	GAGE7	O76087	117 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	GAGE12F	P0CL80	117 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	GAGE12G	P0CL81	117 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	GAGE12I	P0CL82	117 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	GCHFR	P30047	84 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688		Q6ZQT7	251 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	EIF4E3	Q8N5X7	224 aa	Known RBP	11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	FAM210B	Q96KR6	192 aa		11.13	□□□□□ -0.63
UBA7-205	ENST00000478688	KMT2A	Q03164	3969 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	TAAR5	O14804	337 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	CXorf1	O96002	111 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688		P0DMU3	169 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	FAM231A	P0DMU4	169 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	FAM231C	P0DMU5	169 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	AKR1C8P	Q5T2L2	129 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	SSX7	Q7RTT5	188 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	ZNF680	Q8NEM1	530 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	ARPC5L	Q9BPX5	153 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	GSN-AS1	Q9NRJ2	163 aa		11.12	□□□□□ -0.63
UBA7-205	ENST00000478688	NMB	P08949	121 aa		11.11	□□□□□ -0.63
UBA7-205	ENST00000478688	MUC21	Q5SSG8	566 aa		11.11	□□□□□ -0.63
UBA7-205	ENST00000478688	TP53TG3	Q9ULZ0	132 aa		11.11	□□□□□ -0.63
UBA7-205	ENST00000478688	VPS13D	Q5THJ4	4388 aa		11.1	□□□□□ -0.63
UBA7-205	ENST00000478688	IGHV1OR15-1	A0A075B7D0	117 aa		11.1	□□□□□ -0.63
UBA7-205	ENST00000478688		A0A1B0GVG6	124 aa		11.1	□□□□□ -0.63
UBA7-205	ENST00000478688	NUDT3	O95989	172 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms