RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 BTN1A1Q13410 526 aa11.47□□□□□ -0.57
TRIM13-208ENST00000478111 ANXA2RQ3ZCQ2 193 aa11.47□□□□□ -0.57
TRIM13-208ENST00000478111 Q6ZRN7 208 aaPredicted RBP11.47□□□□□ -0.57
TRIM13-208ENST00000478111 C2orf50Q96LR7 162 aa11.47□□□□□ -0.57
TRIM13-208ENST00000478111 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
TRIM13-208ENST00000478111 LYRM2Q9NU23 88 aaPredicted RBP11.47□□□□□ -0.57
TRIM13-208ENST00000478111 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 UBE2L5PA0A1B0GUS4 154 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 LYRM1O43325 122 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 PYYP10082 97 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.57
TRIM13-208ENST00000478111 S100A11P31949 105 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 LINC00315P59091 139 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
TRIM13-208ENST00000478111 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
TRIM13-208ENST00000478111 TMEM252Q8N6L7 170 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 ZNF680Q8NEM1 530 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 FUT9Q9Y231 359 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
TRIM13-208ENST00000478111 TRGV2A0A075B6R0 118 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 C5orf51A6NDU8 294 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 SPINK4O60575 86 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 CRISP2P16562 243 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 BAXQ07812 192 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 GCSAMLQ5JQS6 135 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 Q6ZQT7 251 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
TRIM13-208ENST00000478111 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 RNASE4P34096 147 aaKnown RBP11.44□□□□□ -0.58
TRIM13-208ENST00000478111 TCL1AP56279 114 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 RAB32Q13637 225 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 PDE6HQ13956 83 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 PRR9Q5T870 116 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
TRIM13-208ENST00000478111 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 SIVA1O15304 175 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 NMBP08949 121 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 PVALBP20472 110 aaPredicted RBP11.43□□□□□ -0.58
TRIM13-208ENST00000478111 FGF7P21781 194 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 FAM167A-AS1Q96KT0 104 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 SLC25A2Q9BXI2 301 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 NUDT15Q9NV35 164 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 TIMM9Q9Y5J7 89 aa11.43□□□□□ -0.58
TRIM13-208ENST00000478111 MPDU1O75352 247 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 GPX1P07203 203 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 S100A10P60903 97 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 HBG1P69891 147 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 HBG2P69892 147 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 ATP6V1FQ16864 119 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
TRIM13-208ENST00000478111 ST6GAL2Q96JF0 529 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 VGLL1Q99990 258 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 NPCDR1Q9BY65 106 aa11.42□□□□□ -0.58
TRIM13-208ENST00000478111 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
TRIM13-208ENST00000478111 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
TRIM13-208ENST00000478111 ICAM4Q14773 271 aa11.41□□□□□ -0.58
TRIM13-208ENST00000478111 STX12Q86Y82 276 aa11.41□□□□□ -0.58
TRIM13-208ENST00000478111 ZNF492Q9P255 531 aa11.41□□□□□ -0.58
TRIM13-208ENST00000478111 TNFRSF18Q9Y5U5 241 aa11.41□□□□□ -0.58
TRIM13-208ENST00000478111 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 PAX4O43316 350 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 NXPH4O95158 308 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 IGHV3-53P01767 116 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 H2AFB2P0C5Z0 115 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 MIR17HGQ75NE6 70 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 MRPL16Q9NX20 251 aaKnown RBP11.4□□□□□ -0.58
TRIM13-208ENST00000478111 ICOSQ9Y6W8 199 aa11.4□□□□□ -0.58
TRIM13-208ENST00000478111 MYCBP2O75592 4640 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM13-208ENST00000478111 CRYBA4P53673 196 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 NHLH2Q02577 135 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 FHL2Q14192 279 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 FAM122CQ6P4D5 195 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
TRIM13-208ENST00000478111 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
TRIM13-208ENST00000478111 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
TRIM13-208ENST00000478111 DNAH8Q96JB1 4490 aa11.38□□□□□ -0.59
TRIM13-208ENST00000478111 RGS13O14921 159 aa11.38□□□□□ -0.59
TRIM13-208ENST00000478111 THAP6Q8TBB0 222 aa11.38□□□□□ -0.59
TRIM13-208ENST00000478111 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
TRIM13-208ENST00000478111 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
TRIM13-208ENST00000478111 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
TRIM13-208ENST00000478111 OR5C1Q8NGR4 320 aa11.37□□□□□ -0.59
TRIM13-208ENST00000478111 C8orf49Q96NF6 230 aa11.37□□□□□ -0.59
TRIM13-208ENST00000478111 OR51M1Q9H341 326 aa11.37□□□□□ -0.59
TRIM13-208ENST00000478111 HHLA3Q9XRX5 114 aa11.37□□□□□ -0.59
TRIM13-208ENST00000478111 PRAF2O60831 178 aa11.36□□□□□ -0.59
TRIM13-208ENST00000478111 ZNF138P52744 262 aa11.36□□□□□ -0.59
TRIM13-208ENST00000478111 XGP55808 180 aa11.36□□□□□ -0.59
TRIM13-208ENST00000478111 SLAQ13239 276 aa11.36□□□□□ -0.59
TRIM13-208ENST00000478111 Q8TAT8 98 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms