RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FABP5P3A8MUU1 101 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 M0QZ24 198 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 IGHV3-11P01762 117 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 ZNF138P52744 262 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 HBBP68871 147 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
VMA21-203ENST00000477649 OR10J3Q5JRS4 329 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 TMEM78Q5T7P6 136 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 TMEM136Q6ZRR5 245 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 Q6ZS46 218 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 LINC00518Q8N0U6 118 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 ZC2HC1AQ96GY0 325 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 NRN1Q9NPD7 142 aa6.07□□□□□ -1.44
VMA21-203ENST00000477649 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 TRBV12-3P01733 135 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 APCSP02743 223 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 ESDP10768 282 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 CRISP2P16562 243 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 PAFAH1B2P68402 229 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 UNQ9165/PRO28630Q6UXU0 137 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 GATD1Q8NB37 220 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 OR10J6PQ8NGY7 276 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 TMEM18Q96B42 140 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 SGK494Q96LW2 274 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 JMJD8Q96S16 334 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 RHPN1-AS1Q9BWJ2 59 aa6.06□□□□□ -1.44
VMA21-203ENST00000477649 ANKRD17O75179 2603 aaKnown RBP6.06□□□□□ -1.44
VMA21-203ENST00000477649 CSMD2Q7Z408 3487 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 CR1P17927 2039 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 IGHV3OR16-8A0A075B7F1 116 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 IGKV2-40A0A087WW87 121 aaPredicted RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 TRAV2A0A0B4J234 112 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 TRAV8-2A0A0B4J237 113 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 A0A1B0GUT8 65 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 TMEM189A5PLL7 270 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 F2Z2F3 143 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 SOCS3O14543 225 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 SMAD7O15105 426 aaKnown RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 IGKV2D-40P01614 121 aaPredicted RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 CBLN1P23435 193 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 TCL1AP56279 114 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 RAB4BP61018 213 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 ZNF418Q8TF45 676 aaPredicted RBP6.05□□□□□ -1.44
VMA21-203ENST00000477649 YAE1D1Q9NRH1 226 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 PGPEP1Q9NXJ5 209 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
VMA21-203ENST00000477649 ZNF207O43670 478 aaKnown RBP6.04□□□□□ -1.44
VMA21-203ENST00000477649 SH2D1AO60880 128 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 CA1P00915 261 aaPredicted RBP6.04□□□□□ -1.44
VMA21-203ENST00000477649 RPLP1P05386 114 aaKnown RBP6.04□□□□□ -1.44
VMA21-203ENST00000477649 RNASE1P07998 156 aaKnown RBP6.04□□□□□ -1.44
VMA21-203ENST00000477649 S100A12P80511 92 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 TMEM95Q3KNT9 176 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 KLHDC1Q8N7A1 406 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 ZNF738Q8NE65 137 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 C4orf3Q8WVX3 66 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 VGLL1Q99990 258 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 C16orf95Q9H693 158 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
VMA21-203ENST00000477649 CREBBPQ92793 2442 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 IGHV3-66A0A0C4DH42 116 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 DNAJC9-AS1A6NH13 148 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 CTRLP40313 264 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 CRIP1P50238 77 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
VMA21-203ENST00000477649 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
VMA21-203ENST00000477649 KRTAP1-1Q07627 177 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 KLF5Q13887 457 aaPredicted RBP6.03□□□□□ -1.44
VMA21-203ENST00000477649 TM4SF20Q53R12 229 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 IL17RELQ6ZVW7 336 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 TCF24Q7RTU0 167 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 BAGE3Q86Y29 109 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 DPF1Q92782 380 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 PGLYRP4Q96LB8 373 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 ODF3Q96PU9 254 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 C12orf57Q99622 126 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 HIST1H2BLQ99880 126 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 CNFNQ9BYD5 112 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 GPR61Q9BZJ8 451 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 ZFHX3Q15911 3703 aa6.03□□□□□ -1.44
VMA21-203ENST00000477649 FBN2P35556 2912 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 IGHV3OR16-13A0A075B7E8 117 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 IGHV3-49A0A0A0MS15 119 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 IGHV3-74A0A0B4J1X5 117 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 TRAV21A0A0B4J279 112 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 TMEM213A2RRL7 107 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 ZNF705FA8MVS1 300 aaPredicted RBP6.02□□□□□ -1.45
VMA21-203ENST00000477649 LINC01619G3V211 115 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 SPINK4O60575 86 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 RAB4AP20338 218 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 HOXD3P31249 432 aaPredicted RBP6.02□□□□□ -1.45
VMA21-203ENST00000477649 ZNF493Q6ZR52 646 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 APRG1Q8IVJ8 170 aa6.02□□□□□ -1.45
VMA21-203ENST00000477649 RNF182Q8N6D2 247 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms