RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TPSG1Q9NRR2 321 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 NBEAQ8NFP9 2946 aa11.99□□□□□ -0.49
CLSTN1-205ENST00000477264 PKD1L2Q7Z442 2459 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 ETDBQ3ZM63 59 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 TMEM108Q6UXF1 575 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 AAMDCQ9H7C9 122 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 IGHV1-46P01743 117 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 KLRD1Q13241 179 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 ZNF418Q8TF45 676 aaPredicted RBP11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 TMEM133Q9H2Q1 129 aa11.98□□□□□ -0.49
CLSTN1-205ENST00000477264 LEPP41159 167 aa11.97□□□□□ -0.49
CLSTN1-205ENST00000477264 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
CLSTN1-205ENST00000477264 POLEQ07864 2286 aa11.97□□□□□ -0.49
CLSTN1-205ENST00000477264 H3BMG7 143 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 CRYGBP07316 175 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 PRSS1P07477 247 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 IGLC6P0CF74 106 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 FXYD7P58549 80 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 ZC2HC1BQ5TFG8 222 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 C8orf49Q96NF6 230 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 CNFNQ9BYD5 112 aa11.96□□□□□ -0.49
CLSTN1-205ENST00000477264 CCL3L1P16619 93 aa11.96□□□□□ -0.5
CLSTN1-205ENST00000477264 Q5PR19 223 aa11.96□□□□□ -0.5
CLSTN1-205ENST00000477264 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.5
CLSTN1-205ENST00000477264 VCX2Q9H322 139 aa11.96□□□□□ -0.5
CLSTN1-205ENST00000477264 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.5
CLSTN1-205ENST00000477264 TRAV26-1A0A087WT03 109 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 MRPS12O15235 138 aaKnown RBP11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 C22orf34Q6ZV56 151 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 SH2D6Q7Z4S9 175 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 FOXC2Q99958 501 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 ACACBO00763 2458 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 I3L2K1 104 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 CD40P25942 277 aa11.95□□□□□ -0.5
CLSTN1-205ENST00000477264 COL6A6A6NMZ7 2263 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 APOMO95445 188 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 RBP4P02753 201 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 CRYBA4P53673 196 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 TMEM200BQ69YZ2 307 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 C8orf86Q6ZUL3 223 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 GTSCR1Q86UQ5 136 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 FAM90A27PA6NNH2 459 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 PLNP26678 52 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 Q8N8P6 123 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
CLSTN1-205ENST00000477264 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
CLSTN1-205ENST00000477264 NCBP2LA6PVI3 153 aaKnown RBP11.93□□□□□ -0.5
CLSTN1-205ENST00000477264 DIAPH2-AS1Q14236 149 aa11.93□□□□□ -0.5
CLSTN1-205ENST00000477264 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
CLSTN1-205ENST00000477264 HIST1H4GQ99525 98 aa11.93□□□□□ -0.5
CLSTN1-205ENST00000477264 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 ENSAO43768 121 aaKnown RBP11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 FOXI1Q12951 378 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 RNF125Q96EQ8 232 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 C17orf77Q96MU5 243 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 ADORA2A-AS1P86434 159 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 LYRM7Q5U5X0 104 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
CLSTN1-205ENST00000477264 FBXL19-AS1Q494R0 122 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 WFDC12Q8WWY7 111 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 PRR25Q96S07 402 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 A6NJY4 79 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 M0R3E3 92 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 BSPH1Q075Z2 132 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
CLSTN1-205ENST00000477264 CADP27708 2225 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 A0A087WX48 190 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 NUP37Q8NFH4 326 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 RPEQ96AT9 228 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 ASCL2Q99929 193 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 NBASA2RRP1 2371 aa11.9□□□□□ -0.5
CLSTN1-205ENST00000477264 NDUFB3O43676 98 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 DLX6P56179 175 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 TSPAN13O95857 204 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 ATP5G2Q06055 141 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms