RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 V9GYY9 64 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 TMSB15BA0A087X1C1 80 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 A0A1W2PPI3 338 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 GAS8-AS1O95177 125 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 TIRAPP58753 221 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 LINC00305Q7Z4B0 112 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 NPIPB3Q92617 1050 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 PSMG3-AS1Q96PY0 264 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 TRAV17A0A0B4J275 112 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 C19orf71A6NCJ1 209 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 IGLV2-11P01706 119 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 DLX1P56177 255 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 TMEM167AQ8TBQ9 72 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 LINC00312Q9Y6C7 94 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 hADV38S2A0JD32 116 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 D6R8Y8 96 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 DLL1O00548 723 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 THBDP07204 575 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 CRYGBP07316 175 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 GP9P14770 177 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 COL8A1P27658 744 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 TNFAIP6P98066 277 aaPredicted RBP6.61□□□□□ -1.35
VAPB-205ENST00000476395 C10orf113Q5VZT2 155 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 GPR82Q96P67 336 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 MRPL32Q9BYC8 188 aaKnown RBP6.61□□□□□ -1.35
VAPB-205ENST00000476395 SIGLEC8Q9NYZ4 499 aa6.61□□□□□ -1.35
VAPB-205ENST00000476395 TCRBV4S1A1TA0A5B7 111 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 PRNTQ86SH4 94 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 EXOC3-AS1Q8N2X6 119 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
VAPB-205ENST00000476395 ZNF418Q8TF45 676 aaPredicted RBP6.6□□□□□ -1.35
VAPB-205ENST00000476395 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
VAPB-205ENST00000476395 CD40P25942 277 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 CNTFRP26992 372 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 AMN1Q8IY45 258 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 SYT8Q8NBV8 401 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
VAPB-205ENST00000476395 SRSF12Q8WXF0 261 aaKnown RBP6.6□□□□□ -1.35
VAPB-205ENST00000476395 CCL8P80075 99 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 GTSCR1Q86UQ5 136 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 DEFB109BQ30KR1 87 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 ZNF575Q86XF7 245 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 PDPNQ86YL7 162 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 NUP37Q8NFH4 326 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 ZNF414Q96IQ9 312 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 C1QTNF4Q9BXJ3 329 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 CSN1S1P47710 185 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 EMP1P54849 157 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 XGP55808 180 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 IGFL3Q6UXB1 125 aa6.59□□□□□ -1.35
VAPB-205ENST00000476395 RBMXL3Q8N7X1 1067 aaKnown RBP6.59□□□□□ -1.35
VAPB-205ENST00000476395 LOXP28300 417 aaPredicted RBP6.58□□□□□ -1.36
VAPB-205ENST00000476395 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 WI2-2373I1.2A0A1W2PRP0 233 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 IGLL5B9A064 214 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 J3QLI3 93 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 SPINK8P0C7L1 97 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 FOXC1Q12948 553 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 FAM162BQ5T6X4 162 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GOLT1AQ6ZVE7 132 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 MAPKAPK5-AS1Q8N8E1 139 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 PTPRQQ9UMZ3 2332 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE7O76087 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE12FP0CL80 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE12GP0CL81 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE12IP0CL82 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 PRTN3P24158 256 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 FCER1GP30273 86 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 PRB3Q04118 309 aaPredicted RBP6.58□□□□□ -1.36
VAPB-205ENST00000476395 GAGE4Q13068 117 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 OR4X2Q8NGF9 303 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 C17orf77Q96MU5 243 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
VAPB-205ENST00000476395 ZFYVE26Q68DK2 2539 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 Q6ZS92 163 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 C8orf86Q6ZUL3 223 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 C8orf31Q8N9H6 132 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 Q9H3A6 140 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 MALRD1Q5VYJ5 2156 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 CENPVL3A0A0U1RRI6 287 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 TMEM178BH3BS89 294 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 NDUFS7O75251 213 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 TCRAP04437 139 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 IFI27L1Q96BM0 104 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 A0A1B0GUT8 65 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 FAM90A27PA6NNH2 459 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 E9PLD3 99 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms