RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NSUN5P1Q3KNT7 163 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 BAGE2Q86Y30 109 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 C15orf54Q8N8G6 183 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM75Q8N9X5 138 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 DYNLRB2Q8TF09 96 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 DLX4Q92988 240 aaPredicted RBP5.31□□□□□ -1.56
SHQ1-207ENST00000475558 RAX2Q96IS3 184 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 LINC00052Q96N35 136 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 WWC2-AS2Q96NR7 200 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 SPAG8Q99932 426 aaPredicted RBP5.31□□□□□ -1.56
SHQ1-207ENST00000475558 PARLQ9H300 379 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
SHQ1-207ENST00000475558 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 GGTLC3B5MD39 225 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 M0R036 132 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 ZNF207O43670 478 aaKnown RBP5.3□□□□□ -1.56
SHQ1-207ENST00000475558 APOHP02749 345 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-207ENST00000475558 CSN3P07498 182 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 ATP5G3P48201 142 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 ZNF674Q2M3X9 581 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 DEFB121Q5J5C9 76 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 WFDC9Q8NEX5 89 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 OR10J6PQ8NGY7 276 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 C2CD4CQ8TF44 421 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 DAZAP1Q96EP5 407 aaKnown RBP5.3□□□□□ -1.56
SHQ1-207ENST00000475558 IMMP2LQ96T52 175 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 FAM110AQ9BQ89 295 aa5.3□□□□□ -1.56
SHQ1-207ENST00000475558 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 K7EIL1 84 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 EIF3GO75821 320 aaKnown RBP eCLIP5.29□□□□□ -1.56
SHQ1-207ENST00000475558 GCGP01275 180 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 CT45A10P0DMU9 189 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 SLURP1P55000 103 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 FLI1Q01543 452 aaPredicted RBP5.29□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM78Q5T7P6 136 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 EBLN2Q6P2I7 272 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 C9orf47Q6ZRZ4 202 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 TMEM183AQ8IXX5 376 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 OCC1Q8TAD7 63 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 C17orf77Q96MU5 243 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 MS4A6AQ9H2W1 248 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 OSTCQ9NRP0 149 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 PSG8Q9UQ74 426 aa5.29□□□□□ -1.56
SHQ1-207ENST00000475558 IGHV3OR16-13A0A075B7E8 117 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 IGHV3OR16-8A0A075B7F1 116 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 IGHV3-74A0A0B4J1X5 117 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 C7orf77A4D0Y5 90 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 FAM231BA6NCW3 169 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 K7EQG2 157 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 LTAP01374 205 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 IGLL1P15814 213 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 S100PP25815 95 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 TSPOP30536 169 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 ZNF138P52744 262 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 RPL23P62829 140 aaKnown RBP5.28□□□□□ -1.56
SHQ1-207ENST00000475558 C9orf66Q5T8R8 295 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 FAM231DQ6ZW35 169 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 LINC01551Q86U37 167 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 EXOC3-AS1Q8N2X6 119 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 DCANP1Q8TF63 244 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 CLUHP3Q96NS8 147 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 ODF3Q96PU9 254 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 ASCL2Q99929 193 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 SAV1Q9H4B6 383 aaPredicted RBP5.28□□□□□ -1.56
SHQ1-207ENST00000475558 RPS10P5Q9NQ39 176 aa5.28□□□□□ -1.56
SHQ1-207ENST00000475558 TRAV9-1A0A075B6T8 112 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 A0A1W2PRX2 142 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 FABP5P3A8MUU1 101 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 SOCS3O14543 225 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 ERVFC1-1P60608 527 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 RPS20P60866 119 aaKnown RBP5.27□□□□□ -1.57
SHQ1-207ENST00000475558 ADIRFQ15847 76 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 DEFB136Q30KP8 78 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 COX19Q49B96 90 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 SMUG1Q53HV7 270 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 KCNIP4Q6PIL6 250 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 FOXI2Q6ZQN5 318 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF738Q8NE65 137 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 OR4B1Q8NGF8 309 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 OR10G8Q8NGN5 311 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 SFRP2Q96HF1 295 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 B9D2Q9BPU9 175 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 MLST8Q9BVC4 326 aa5.27□□□□□ -1.57
SHQ1-207ENST00000475558 TRAV8-2A0A0B4J237 113 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 A8MWL6 223 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 H3BTX0 84 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 H7BYZ3 331 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms