RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RHEBQ15382 184 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 GUCA2BQ16661 112 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 DEFB125Q8N687 156 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 LY96Q9Y6Y9 160 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 CSMD3Q7Z407 3707 aa11.62□□□□□ -0.55
CPSF3-203ENST00000475482 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
CPSF3-203ENST00000475482 ID1P41134 155 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 GNG4P50150 75 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 CLRN3Q8NCR9 226 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 STARD9Q9P2P6 4700 aa11.61□□□□□ -0.55
CPSF3-203ENST00000475482 ISLRO14498 428 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 SMIM12Q96EX1 92 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 SRD5A3Q9H8P0 318 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 SELENOKQ9Y6D0 94 aa11.6□□□□□ -0.55
CPSF3-203ENST00000475482 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 TSPAN4O14817 238 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 GNG5P63218 68 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 DERL1Q9BUN8 251 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 SACSQ9NZJ4 4579 aa11.59□□□□□ -0.55
CPSF3-203ENST00000475482 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
CPSF3-203ENST00000475482 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.56
CPSF3-203ENST00000475482 ADIRFQ15847 76 aa11.58□□□□□ -0.56
CPSF3-203ENST00000475482 PSG3Q16557 428 aa11.58□□□□□ -0.56
CPSF3-203ENST00000475482 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
CPSF3-203ENST00000475482 GOLT1AQ6ZVE7 132 aa11.58□□□□□ -0.56
CPSF3-203ENST00000475482 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
CPSF3-203ENST00000475482 TENM2Q9NT68 2774 aa11.57□□□□□ -0.56
CPSF3-203ENST00000475482 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
CPSF3-203ENST00000475482 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
CPSF3-203ENST00000475482 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
CPSF3-203ENST00000475482 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
CPSF3-203ENST00000475482 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
CPSF3-203ENST00000475482 M0R3E3 92 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 BAGE2Q86Y30 109 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 MS4A6AQ9H2W1 248 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
CPSF3-203ENST00000475482 IGKV3-7A0A075B6H7 116 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 A0A087WWC5 75 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 SOCS3O14543 225 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
CPSF3-203ENST00000475482 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 NDFIP1Q9BT67 221 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 CTDSP1Q9GZU7 261 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 RETNQ9HD89 108 aa11.55□□□□□ -0.56
CPSF3-203ENST00000475482 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 TRAV34A0A0B4J273 112 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 LTAP01374 205 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 RNF182Q8N6D2 247 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 OCC1Q8TAD7 63 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 ANAPC16Q96DE5 110 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 LINC00479Q96M42 142 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 PSG8Q9UQ74 426 aa11.54□□□□□ -0.56
CPSF3-203ENST00000475482 K7EQG2 157 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 Q86TA4 180 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 GBGT1Q8N5D6 347 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 OR10J6PQ8NGY7 276 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 TMEM242Q9NWH2 141 aa11.53□□□□□ -0.56
CPSF3-203ENST00000475482 RYR2Q92736 4967 aa11.52□□□□□ -0.56
CPSF3-203ENST00000475482 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
CPSF3-203ENST00000475482 OR4C46A6NHA9 309 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
CPSF3-203ENST00000475482 HLA-DMBP28068 263 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
CPSF3-203ENST00000475482 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
CPSF3-203ENST00000475482 CXorf65A6NEN9 183 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 ZNF705FA8MVS1 300 aaPredicted RBP11.51□□□□□ -0.57
CPSF3-203ENST00000475482 GCGP01275 180 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
CPSF3-203ENST00000475482 IGLV2-11P01706 119 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms