RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	TRBV10-2	A0A0K0K1G8	114 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	LINC01549	A6NIU2	74 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	KNCN	A6PVL3	124 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319		H3BP45	60 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319		H3BSH0	61 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	HBD	P02042	147 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CA6	P23280	308 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	KRTAP10-9	P60411	292 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	FXYD3	Q14802	87 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ATXN8	Q156A1	80 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CLLU1OS	Q5K130	101 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	RNF182	Q8N6D2	247 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	TMEM105	Q8N8V8	129 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	OR8A1	Q8NGG7	326 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	C10orf105	Q8TEF2	133 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	UPK3B	Q9BT76	320 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	OTOR	Q9NRC9	128 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CHD7	Q9P2D1	2997 aa		4.63	□□□□□ -1.67
ECHDC1-215	ENST00000475319	TRBV7-6	A0A0J9YX20	115 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319		A0A1B0GWA3	101 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	NCBP2L	A6PVI3	153 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319		H3BTX0	84 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SCRG1	O75711	98 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGF1	P05019	195 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ARL14EPL	P0DKL9	152 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PCBD1	P61457	104 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	RPL18A	Q02543	176 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	NFAM1	Q8NET5	270 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	WFDC11	Q8NEX6	87 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PRSS3P2	Q8NHM4	247 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CYYR1	Q96J86	154 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGF2BP2-AS1	Q96M15	143 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	FOXC2	Q99958	501 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	EMC6	Q9BV81	110 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SRXN1	Q9BYN0	137 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PRSS22	Q9GZN4	317 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319		Q9UF83	564 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SCN2A	Q99250	2005 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGLV3-16	A0A075B6K0	115 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	TRBV19	A0A075B6N1	114 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGKV1D-8	A0A087WSZ0	117 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	HIGD1C	A8MV81	97 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PRSS46	E5RG02	174 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	UPK2	O00526	184 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PEX7	O00628	323 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CCL16	O15467	120 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	BUB3	O43684	328 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	GNLY	P22749	145 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	HOXD3	P31249	432 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	MYCNOS	P40205	109 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ATP5E	P56381	51 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SPANXN5	Q5MJ07	72 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PAPPA-AS1	Q5QFB9	102 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	NT5C	Q8TCD5	201 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	AICDA	Q9GZX7	198 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DYNLRB1	Q9NP97	96 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CALY	Q9NYX4	217 aa		4.62	□□□□□ -1.67
ECHDC1-215	ENST00000475319	VWA8	A3KMH1	1905 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DOCK4	Q8N1I0	1966 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGKV6-21	A0A0C4DH24	114 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319		M0R1B8	84 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGLV2-8	P01709	118 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IAPP	P10997	89 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	HMGA1	P17096	107 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	LMO2	P25791	158 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	FCER1G	P30273	86 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	RPS18	P62269	152 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	C9orf57	Q5W0N0	161 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	FAM104B	Q5XKR9	115 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ZFP2	Q6ZN57	461 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DCAF4L2	Q8NA75	395 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	FMC1	Q96HJ9	113 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	HES7	Q9BYE0	225 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DAZ1	Q9NQZ3	744 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	WDR83OS	Q9Y284	106 aa		4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-215	ENST00000475319	MRPS12	O15235	138 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	TCRA	P04437	139 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CISD3	P0C7P0	127 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SYNJ2BP	P57105	145 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGFL4	Q6B9Z1	124 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319		Q6ZR03	302 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	LINC00305	Q7Z4B0	112 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SSMEM1	Q8WWF3	244 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	S1PR3	Q99500	378 aa		4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-215	ENST00000475319	VCAN	P13611	3396 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	IGKV2D-26	A0A0A0MRZ7	120 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PLAC8L1	A1L4L8	177 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	LINC01548	A6NM66	108 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SLC25A16	P16260	332 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DAZ2	Q13117	558 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	TMEM52B	Q4KMG9	183 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SDIM1	Q6ZPB5	146 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319		Q6ZSV7	163 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DAZ4	Q86SG3	579 aa	Known RBP	4.59	□□□□□ -1.67

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