RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SLC25A5P05141 298 aaKnown RBP17.06■□□□□ 0.32
CPNE1-223ENST00000475146 DEFB130BP0DP73 79 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 DEFB130AP0DP74 79 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 CSN1S1P47710 185 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 ZNF493Q6ZR52 646 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 C9orf47Q6ZRZ4 202 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 CCDC28AQ8IWP9 274 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 OR10G4Q8NGN3 311 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 OR10G9Q8NGN4 311 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 OR10G7Q8NGN6 311 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 TMEM263Q8WUH6 116 aaKnown RBP17.06■□□□□ 0.32
CPNE1-223ENST00000475146 VGLL1Q99990 258 aa17.06■□□□□ 0.32
CPNE1-223ENST00000475146 LYPD1Q8N2G4 141 aa17.05■□□□□ 0.32
CPNE1-223ENST00000475146 RNASE8Q8TDE3 154 aaKnown RBP17.05■□□□□ 0.32
CPNE1-223ENST00000475146 C7orf71A4D174 169 aa17.04■□□□□ 0.32
CPNE1-223ENST00000475146 HMGB3O15347 200 aaKnown RBP17.04■□□□□ 0.32
CPNE1-223ENST00000475146 ATP6V0CP27449 155 aa17.04■□□□□ 0.32
CPNE1-223ENST00000475146 PQLC2Q6ZP29 291 aa17.04■□□□□ 0.32
CPNE1-223ENST00000475146 OR2G3Q8NGZ4 309 aa17.04■□□□□ 0.32
CPNE1-223ENST00000475146 PSMG3Q9BT73 122 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-223ENST00000475146 TNFSF18Q9UNG2 199 aa17.04■□□□□ 0.32
CPNE1-223ENST00000475146 TIMM8BQ9Y5J9 83 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-223ENST00000475146 RNF222A6NCQ9 220 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 KLLNB2CW77 178 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 BTN1A1Q13410 526 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 FAM210BQ96KR6 192 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 FAM19A4Q96LR4 140 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 PYGO2Q9BRQ0 406 aa17.03■□□□□ 0.32
CPNE1-223ENST00000475146 NOP10Q9NPE3 64 aaKnown RBP17.03■□□□□ 0.32
CPNE1-223ENST00000475146 RNASE4P34096 147 aaKnown RBP17.02■□□□□ 0.32
CPNE1-223ENST00000475146 CDC34P49427 236 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-223ENST00000475146 CD300CQ08708 224 aa17.02■□□□□ 0.32
CPNE1-223ENST00000475146 ZNF492Q9P255 531 aa17.02■□□□□ 0.32
CPNE1-223ENST00000475146 BORCS7-ASMTA0A0B4J1R7 106 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 GPX1P07203 203 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 CRISP2P16562 243 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 ZNF138P52744 262 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 Q8TAT8 98 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 HYLS1Q96M11 299 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 SH3BGRL3Q9H299 93 aa17.01■□□□□ 0.31
CPNE1-223ENST00000475146 RPL7L1Q6DKI1 246 aaKnown RBP17■□□□□ 0.31
CPNE1-223ENST00000475146 CMTM2Q8TAZ6 248 aa17■□□□□ 0.31
CPNE1-223ENST00000475146 OTORQ9NRC9 128 aa17■□□□□ 0.31
CPNE1-223ENST00000475146 RPH3ALQ9UNE2 315 aa17■□□□□ 0.31
CPNE1-223ENST00000475146 RBAKDNA6NC62 111 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 SNURFLB1AK76 121 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 MBP02144 154 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 ARL14EPLP0DKL9 152 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 SERF2P84101 59 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 FAM74A1Q5RGS3 127 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 TMEM88Q6PEY1 159 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 ZFAND2AQ8N6M9 145 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 RXFP4Q8TDU9 374 aa16.99■□□□□ 0.31
CPNE1-223ENST00000475146 PGPA6NDG6 321 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 DIRC3C9JPN6 131 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 G3V3Q6 166 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 ARPC5O15511 151 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 ATP5G1P05496 136 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 NMBP08949 121 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 P0DMU3 169 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 FAM231AP0DMU4 169 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 FAM231CP0DMU5 169 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 ATP5G3P48201 142 aa16.98■□□□□ 0.31
CPNE1-223ENST00000475146 F5H768 121 aa16.97■□□□□ 0.31
CPNE1-223ENST00000475146 PRR9Q5T870 116 aa16.97■□□□□ 0.31
CPNE1-223ENST00000475146 RAB24Q969Q5 203 aa16.97■□□□□ 0.31
CPNE1-223ENST00000475146 GNPNAT1Q96EK6 184 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-223ENST00000475146 CBY3A6NI87 242 aa16.96■□□□□ 0.31
CPNE1-223ENST00000475146 SMLR1H3BR10 107 aa16.96■□□□□ 0.31
CPNE1-223ENST00000475146 ZNF324O75467 553 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-223ENST00000475146 STAG3L2P0CL84 134 aa16.96■□□□□ 0.31
CPNE1-223ENST00000475146 STAG3L3P0CL85 134 aa16.96■□□□□ 0.31
CPNE1-223ENST00000475146 TRBV7-9A0A0J9YWB2 115 aa16.95■□□□□ 0.3
CPNE1-223ENST00000475146 RGS13O14921 159 aa16.95■□□□□ 0.3
CPNE1-223ENST00000475146 EIF4E3Q8N5X7 224 aaKnown RBP16.95■□□□□ 0.3
CPNE1-223ENST00000475146 ZNF680Q8NEM1 530 aa16.95■□□□□ 0.3
CPNE1-223ENST00000475146 ACTR3CQ9C0K3 210 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-223ENST00000475146 GAGE12BA1L429 117 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GAGE7O76087 117 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GAGE12FP0CL80 117 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GAGE12GP0CL81 117 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GAGE12IP0CL82 117 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GCHFRP30047 84 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 UBE2DNLQ8IWF7 75 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 LINC00467Q9BRT7 94 aa16.94■□□□□ 0.3
CPNE1-223ENST00000475146 GOLT1AQ6ZVE7 132 aa16.93■□□□□ 0.3
CPNE1-223ENST00000475146 POM121L12Q8N7R1 296 aa16.93■□□□□ 0.3
CPNE1-223ENST00000475146 GSN-AS1Q9NRJ2 163 aa16.93■□□□□ 0.3
CPNE1-223ENST00000475146 TAAR5O14804 337 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 GNG5P63218 68 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 ANXA2RQ3ZCQ2 193 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 Q6ZQT7 251 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 IQCF2Q8IXL9 164 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 LINC00612Q8N6U2 182 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 C15orf53Q8NAA6 179 aa16.92■□□□□ 0.3
CPNE1-223ENST00000475146 IGHV1OR15-1A0A075B7D0 117 aa16.91■□□□□ 0.3
CPNE1-223ENST00000475146 CXorf1O96002 111 aa16.91■□□□□ 0.3
CPNE1-223ENST00000475146 DAZ2Q13117 558 aaKnown RBP16.91■□□□□ 0.3
CPNE1-223ENST00000475146 C11orf72Q8NBR9 251 aa16.91■□□□□ 0.3
CPNE1-223ENST00000475146 ARPC5LQ9BPX5 153 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms