RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 C12orf54Q6X4T0 127 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 C9orf47Q6ZRZ4 202 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 GOLT1AQ6ZVE7 132 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 FAM231DQ6ZW35 169 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 Q86TA4 180 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 TMEM183AQ8IXX5 376 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 ANAPC16Q96DE5 110 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 IMMP2LQ96T52 175 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 OSTCQ9NRP0 149 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 SMCO4Q9NRQ5 59 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
ATG4A-207ENST00000474825 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.62
ATG4A-207ENST00000474825 TRAV34A0A0B4J273 112 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 TRBV7-9A0A0J9YWB2 115 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 PRAC2D3DTV9 90 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 NPIPB6E9PJ23 425 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 K7EQM0 130 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 M0QZ24 198 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 M0R036 132 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 OVOL1O14753 267 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 GHRHP01286 108 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 MT-ND4LP03901 98 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 PFN1P07737 140 aaKnown RBP4.96□□□□□ -1.62
ATG4A-207ENST00000474825 UBE2G1P62253 170 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 FLI1Q01543 452 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-207ENST00000474825 ADIRFQ15847 76 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 DEFB114Q30KQ6 69 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 RNF212Q495C1 297 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 APRG1Q8IVJ8 170 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 C11orf44Q8N8P7 122 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 SFRP2Q96HF1 295 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 C16orf92Q96LL3 132 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 C20orf173Q96LM9 149 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 DUX3Q96PT4 197 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 PYGO2Q9BRQ0 406 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 MS4A6AQ9H2W1 248 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 RPS10P5Q9NQ39 176 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF492Q9P255 531 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 PSG8Q9UQ74 426 aa4.96□□□□□ -1.62
ATG4A-207ENST00000474825 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 TRAV8-1A0A0A6YYK1 113 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 COLCA2A8K830 154 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 A8MTW9 85 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF705FA8MVS1 300 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-207ENST00000474825 ID1P41134 155 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 BTN1A1Q13410 526 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 KHDC1LQ5JSQ8 128 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 SAPCD1Q5SSQ6 148 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 IGFL4Q6B9Z1 124 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 HIST2H2BDQ6DRA6 164 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 RNF182Q8N6D2 247 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 C15orf54Q8N8G6 183 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 LINC00482Q8N8I6 264 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 OR2K2Q8NGT1 345 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 LINC00477Q96M19 166 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 PRR25Q96S07 402 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 AGPAT4-IT1Q9H0P7 198 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 BIN3Q9NQY0 253 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 V9GYV3 84 aa4.95□□□□□ -1.62
ATG4A-207ENST00000474825 TRBV24-1A0A075B6N3 115 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 IGKV2-40A0A087WW87 121 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 A0A1W2PRX2 142 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 H7BYZ3 331 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 IGKV2D-40P01614 121 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 IGLV1-51P01701 117 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 CRISP2P16562 243 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 CRIP1P50238 77 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF138P52744 262 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 PAFAH1B2P68402 229 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 OR5I1Q13606 314 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 ELOBQ15370 118 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 CT83Q5H943 113 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 LINC00322Q6ZN03 302 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 CBLN2Q8IUK8 224 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 TMEM61Q8N0U2 210 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 FAM24BQ8N5W8 94 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 C3orf56Q8N813 242 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 NUDT10Q8NFP7 164 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 OR10G8Q8NGN5 311 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 NUDT11Q96G61 164 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 CLUHP3Q96NS8 147 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 ODF3Q96PU9 254 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 SPAG8Q99932 426 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 VGLL1Q99990 258 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 FAM110AQ9BQ89 295 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF747Q9BV97 191 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 AURKAIP1Q9NWT8 199 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF256Q9Y2P7 627 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-207ENST00000474825 TENM1Q9UKZ4 2725 aa4.94□□□□□ -1.62
ATG4A-207ENST00000474825 TRAV9-1A0A075B6T8 112 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 SMIM27A0A1W2PRY6 76 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms