RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 KIR2DL5AQ8N109 375 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 RNF182Q8N6D2 247 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 SIGLECL1Q8N7X8 197 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 Q8N976 141 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 MAPK1IP1LQ8NDC0 245 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 CNFNQ9BYD5 112 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 SAMD10Q9BYL1 202 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 AGPAT4-IT1Q9H0P7 198 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 NRN1Q9NPD7 142 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 RNF114Q9Y508 228 aa7.48□□□□□ -1.21
USP39-214ENST00000474572 IGHV3OR16-13A0A075B7E8 117 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 IGHV3-49A0A0A0MS15 119 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 IGHV3-74A0A0B4J1X5 117 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 FABP5P3A8MUU1 101 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 IGHV3-11P01762 117 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 PRB4P10163 310 aaPredicted RBP7.47□□□□□ -1.21
USP39-214ENST00000474572 ZNF138P52744 262 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 HIST1H1AQ02539 215 aaPredicted RBP7.47□□□□□ -1.21
USP39-214ENST00000474572 ERCC8Q13216 396 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 BORCS7Q96B45 105 aa7.47□□□□□ -1.21
USP39-214ENST00000474572 CHCHD1Q96BP2 118 aaKnown RBP7.47□□□□□ -1.21
USP39-214ENST00000474572 PEF1Q9UBV8 284 aaKnown RBP7.47□□□□□ -1.21
USP39-214ENST00000474572 TMEM95Q3KNT9 176 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 LYZL1Q6UWQ5 148 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 IL17RELQ6ZVW7 336 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 Q8N2B8 174 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 C16orf92Q96LL3 132 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 C20orf173Q96LM9 149 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 Q96MF0 132 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 ZNF702PQ9H963 129 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 SMPXQ9UHP9 88 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 U3KQK5 164 aa7.46□□□□□ -1.22
USP39-214ENST00000474572 FBN2P35556 2912 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 OVOL1O14753 267 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 HSBP1O75506 76 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 SCGB1D1O95968 90 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 ELANEP08246 267 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 RAB4AP20338 218 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 PMCHP20382 165 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 FOXE3Q13461 319 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 LCNL1Q6ZST4 164 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 FER1L6-AS1Q8NA97 138 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 FAM19A4Q96LR4 140 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 LINC00477Q96M19 166 aa7.45□□□□□ -1.22
USP39-214ENST00000474572 DAZ1Q9NQZ3 744 aaKnown RBP7.45□□□□□ -1.22
USP39-214ENST00000474572 FLNCQ14315 2725 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 IGKV3D-20A0A0C4DH25 116 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 TMEM213A2RRL7 107 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 DDTP30046 118 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 FAM104BQ5XKR9 115 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 PRO1933Q9H354 126 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 UFC1Q9Y3C8 167 aa7.44□□□□□ -1.22
USP39-214ENST00000474572 ZNF462Q96JM2 2506 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 LGALS9O00182 355 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 HOXA3O43365 443 aaPredicted RBP7.43□□□□□ -1.22
USP39-214ENST00000474572 SNAI2O43623 268 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 LGALS1P09382 135 aaKnown RBP7.43□□□□□ -1.22
USP39-214ENST00000474572 CD33P20138 364 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 FAM106AQ4KMX7 169 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 C10orf99Q6UWK7 81 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 TEX29Q8N6K0 151 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 ZFAND2AQ8N6M9 145 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 TMEM191AQ9H0A3 160 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
USP39-214ENST00000474572 IGHV4-4A0A075B6R2 117 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 C2orf70A6NJV1 201 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 M0R2Z0 102 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 ORM1P02763 201 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
USP39-214ENST00000474572 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 LINC00614P0C842 121 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 ZNF705DP0CH99 300 aaPredicted RBP7.42□□□□□ -1.22
USP39-214ENST00000474572 ZNF705BP0CI00 300 aaPredicted RBP7.42□□□□□ -1.22
USP39-214ENST00000474572 PLA2G2AP14555 144 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 NTF3P20783 257 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 KRTDAPP60985 99 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 PRR9Q5T870 116 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 EBLN2Q6P2I7 272 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 RNASEKQ6P5S7 137 aaKnown RBP7.42□□□□□ -1.22
USP39-214ENST00000474572 TMEM86BQ8N661 226 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 DCANP1Q8TF63 244 aa7.42□□□□□ -1.22
USP39-214ENST00000474572 C14orf144Q96I85 54 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms