RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 INO80EQ8NBZ0 244 aaPredicted RBP11.37□□□□□ -0.59
ITGB1-210ENST00000474568 OR10G4Q8NGN3 311 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 OR10G9Q8NGN4 311 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 OR10G7Q8NGN6 311 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
ITGB1-210ENST00000474568 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
ITGB1-210ENST00000474568 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 Q8TAT8 98 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 HYLS1Q96M11 299 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 NDUFAF3Q9BU61 184 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 SH3BGRL3Q9H299 93 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
ITGB1-210ENST00000474568 TNFSF18Q9UNG2 199 aa11.36□□□□□ -0.59
ITGB1-210ENST00000474568 LYRM9A8MSI8 78 aa11.35□□□□□ -0.59
ITGB1-210ENST00000474568 CSN1S1P47710 185 aa11.35□□□□□ -0.59
ITGB1-210ENST00000474568 CD300CQ08708 224 aa11.35□□□□□ -0.59
ITGB1-210ENST00000474568 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
ITGB1-210ENST00000474568 CCDC28AQ8IWP9 274 aa11.35□□□□□ -0.59
ITGB1-210ENST00000474568 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
ITGB1-210ENST00000474568 EPPK1P58107 5090 aaKnown RBP11.35□□□□□ -0.59
ITGB1-210ENST00000474568 C7orf71A4D174 169 aa11.34□□□□□ -0.59
ITGB1-210ENST00000474568 G3V3Q6 166 aa11.34□□□□□ -0.59
ITGB1-210ENST00000474568 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
ITGB1-210ENST00000474568 CDC34P49427 236 aaPredicted RBP11.34□□□□□ -0.59
ITGB1-210ENST00000474568 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
ITGB1-210ENST00000474568 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
ITGB1-210ENST00000474568 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
ITGB1-210ENST00000474568 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
ITGB1-210ENST00000474568 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
ITGB1-210ENST00000474568 PGPA6NDG6 321 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 GPX1P07203 203 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 ARL14EPLP0DKL9 152 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 PRR9Q5T870 116 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 TMEM88Q6PEY1 159 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 Q6ZQT7 251 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
ITGB1-210ENST00000474568 DNAH6Q9C0G6 4158 aa11.33□□□□□ -0.6
ITGB1-210ENST00000474568 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 KLLNB2CW77 178 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 F5H768 121 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 ARPC5O15511 151 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 ZNF138P52744 262 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 LYPD1Q8N2G4 141 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
ITGB1-210ENST00000474568 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
ITGB1-210ENST00000474568 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
ITGB1-210ENST00000474568 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
ITGB1-210ENST00000474568 CRISP2P16562 243 aa11.31□□□□□ -0.6
ITGB1-210ENST00000474568 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
ITGB1-210ENST00000474568 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
ITGB1-210ENST00000474568 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 CBY3A6NI87 242 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GAGE7O76087 117 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 STAG3L2P0CL84 134 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GNG5P63218 68 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 IQCF2Q8IXL9 164 aa11.3□□□□□ -0.6
ITGB1-210ENST00000474568 MBP02144 154 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 ATP5G1P05496 136 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 GCHFRP30047 84 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 ATP5G3P48201 142 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 SERF2P84101 59 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 FAM74A1Q5RGS3 127 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-210ENST00000474568 ACTR3CQ9C0K3 210 aaPredicted RBP11.29□□□□□ -0.6
ITGB1-210ENST00000474568 GSN-AS1Q9NRJ2 163 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 TP53TG3Q9ULZ0 132 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
ITGB1-210ENST00000474568 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
ITGB1-210ENST00000474568 RGS13O14921 159 aa11.28□□□□□ -0.6
ITGB1-210ENST00000474568 UBE2DNLQ8IWF7 75 aa11.28□□□□□ -0.6
ITGB1-210ENST00000474568 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
ITGB1-210ENST00000474568 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
ITGB1-210ENST00000474568 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.6
ITGB1-210ENST00000474568 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 NMBP08949 121 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 P0DMU3 169 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 MUC21Q5SSG8 566 aa11.27□□□□□ -0.61
ITGB1-210ENST00000474568 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms