RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CDKN1BP46527 198 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 CSN1S1P47710 185 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 ZNF726P1Q15940 193 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 TMEM208Q9BTX3 173 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 PGPA6NDG6 321 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 J3KRW8 73 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 CXorf1O96002 111 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 GCHFRP30047 84 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 TCTAP57738 103 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 CD300CQ08708 224 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 LGALSLQ3ZCW2 172 aaPredicted RBP12.97□□□□□ -0.33
SNX4-204ENST00000473417 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 NEU1Q99519 415 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 DNAH10Q8IVF4 4471 aa12.97□□□□□ -0.33
SNX4-204ENST00000473417 DNAH6Q9C0G6 4158 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 CTXND1A0A1B0GTU2 59 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 C11orf94C9JXX5 98 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 TSPOP30536 169 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 IQCF2Q8IXL9 164 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 VGLL1Q99990 258 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.33
SNX4-204ENST00000473417 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 HBE1P02100 147 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 PRM2P04554 102 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 SEC11BP0C7V7 166 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 LEPP41159 167 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
SNX4-204ENST00000473417 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 RPH3ALQ9UNE2 315 aa12.95□□□□□ -0.34
SNX4-204ENST00000473417 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
SNX4-204ENST00000473417 EMP1P54849 157 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 FGF8P55075 233 aaPredicted RBP12.94□□□□□ -0.34
SNX4-204ENST00000473417 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 Q6ZTC4 211 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 LINC01587Q99440 93 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
SNX4-204ENST00000473417 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 TPT1P13693 172 aaKnown RBP12.93□□□□□ -0.34
SNX4-204ENST00000473417 FHITP49789 147 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 TMEM78Q5T7P6 136 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 SUN5Q8TC36 379 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 TMPRSS5Q9H3S3 457 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
SNX4-204ENST00000473417 IGLL5B9A064 214 aa12.92□□□□□ -0.34
SNX4-204ENST00000473417 Q8TAT8 98 aa12.92□□□□□ -0.34
SNX4-204ENST00000473417 TMED6Q8WW62 240 aa12.92□□□□□ -0.34
SNX4-204ENST00000473417 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
SNX4-204ENST00000473417 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 LOC102723971A0A1B0GUV8 181 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 MAP1LC3B2A6NCE7 125 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
SNX4-204ENST00000473417 HTN1P15515 57 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 GNG5P63218 68 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 TMEM256Q8N2U0 113 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 STOML3Q8TAV4 291 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 MAP1LC3BQ9GZQ8 125 aa12.91□□□□□ -0.34
SNX4-204ENST00000473417 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 UMAD1C9J7I0 102 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 ZNF138P52744 262 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 SUMO1P63165 101 aaKnown RBP12.9□□□□□ -0.34
SNX4-204ENST00000473417 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 FAM213BQ8TBF2 198 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 C20orf144Q9BQM9 153 aa12.9□□□□□ -0.34
SNX4-204ENST00000473417 KLLNB2CW77 178 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 H7BYZ3 331 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 GPX1P07203 203 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 AZU1P20160 251 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 RNASE4P34096 147 aaKnown RBP12.89□□□□□ -0.35
SNX4-204ENST00000473417 TAS2R60P59551 318 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 UBE2G2P60604 165 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 ZNF767PQ75MW2 155 aa12.89□□□□□ -0.35
SNX4-204ENST00000473417 YTHDF2Q9Y5A9 579 aaKnown RBP12.89□□□□□ -0.35
SNX4-204ENST00000473417 HECTD4Q9Y4D8 3996 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 C7orf71A4D174 169 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 CRISP2P16562 243 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 NIPSNAP3BQ9BS92 247 aa12.88□□□□□ -0.35
SNX4-204ENST00000473417 A0A1B0GV50 99 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms