RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 GZMBP10144 247 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 HLA-DRB4P13762 266 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 NMUP48645 174 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 AQP4P55087 323 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 CMC4P56277 68 aaPredicted RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 IGFBP7Q16270 282 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 LINC01554Q52M75 96 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 MORN3Q6PF18 240 aaPredicted RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 AMTNQ6UX39 209 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 FOXI2Q6ZQN5 318 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 LINC00311Q8N616 119 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 OR5D16Q8NGK9 328 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 WFDC5Q8TCV5 224 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 RPL36ALQ969Q0 106 aaKnown RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 SHANK2-AS3Q9BTD1 123 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 FKBP11Q9NYL4 201 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 ZNF443Q9Y2A4 671 aaPredicted RBP4.24□□□□□ -1.73
RTF1-203ENST00000473214 HLA-DRB4X5D2U9 266 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 MYOFQ9NZM1 2061 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 LRBAP50851 2863 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 CSMD1Q96PZ7 3565 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 ICE1Q9Y2F5 2266 aa4.24□□□□□ -1.73
RTF1-203ENST00000473214 TP53BP1Q12888 1972 aaPredicted RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 FBN3Q75N90 2809 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 IGLV1-50A0A075B6I6 118 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 A8MWL6 223 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 SLC25A5P05141 298 aaKnown RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 ZNF688P0C7X2 276 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 HMGA1P17096 107 aaKnown RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 FOXA1P55317 472 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 GNB2P62879 340 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 ZNF876PQ49A33 203 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 AAED1Q7RTV5 226 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 BPIFA4PQ86YQ2 179 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 TMEM256Q8N2U0 113 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 BPIFB6Q8NFQ5 453 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 OR10P1Q8NGE3 313 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 OR4B1Q8NGF8 309 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 ZNF414Q96IQ9 312 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 YPEL2Q96QA6 119 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 PLA2G12AQ9BZM1 189 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 TXNL4BQ9NX01 149 aaKnown RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 ZNF586Q9NXT0 402 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 EPDR1Q9UM22 224 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 KNL1Q8NG31 2342 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 MYO18AQ92614 2054 aaKnown RBP4.23□□□□□ -1.73
RTF1-203ENST00000473214 CACNA1DQ01668 2161 aa4.23□□□□□ -1.73
RTF1-203ENST00000473214 COL27A1Q8IZC6 1860 aaPredicted RBP4.22□□□□□ -1.73
RTF1-203ENST00000473214 SPENQ96T58 3664 aaKnown RBP4.22□□□□□ -1.73
RTF1-203ENST00000473214 A0A087X002 238 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 IGHV3-66A0A0C4DH42 116 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 K7ERJ3 54 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 BMPR1BO00238 502 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 IGHV3-13P01766 116 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 MT-ND6P03923 174 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 CTSDP07339 412 aaPredicted RBP4.22□□□□□ -1.73
RTF1-203ENST00000473214 AKR1C2P52895 323 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 FAM72BQ86X60 149 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 CD177Q8N6Q3 437 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 Q8N7P7 452 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 C20orf203Q8NBC4 194 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 PRELID3AQ96N28 172 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 TMEM204Q9BSN7 226 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 NAA60Q9H7X0 242 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 NOP16Q9Y3C1 178 aaKnown RBP4.22□□□□□ -1.73
RTF1-203ENST00000473214 ANAPC1Q9H1A4 1944 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 NUMA1Q14980 2115 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 TLN1Q9Y490 2541 aaKnown RBP4.22□□□□□ -1.73
RTF1-203ENST00000473214 NF1P21359 2839 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 OTOGQ6ZRI0 2925 aa4.22□□□□□ -1.73
RTF1-203ENST00000473214 KNTC1P50748 2209 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 IGHV3-49A0A0A0MS15 119 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 IGKV1-9A0A0C4DH69 117 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 IGHV7-4-1A0A0J9YVY3 117 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 GEMIN2O14893 280 aaKnown RBP4.21□□□□□ -1.74
RTF1-203ENST00000473214 UQCRQO14949 82 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 HIST1H2BKO60814 126 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 HIST1H2BJP06899 126 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 ZNF883P0CG24 379 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 ZNF90Q03938 601 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
RTF1-203ENST00000473214 SPATA12Q7Z6I5 190 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 TEN1Q86WV5 123 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 ZNF714Q96N38 554 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 B9D2Q9BPU9 175 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 VAMP8Q9BV40 100 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 DPY30Q9C005 99 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 MED9Q9NWA0 146 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 ZNF835Q9Y2P0 537 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 PHLDA3Q9Y5J5 127 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms