RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MANBALQ9NQG1 85 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 TRAV5A0A0B4J249 113 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF207O43670 478 aaKnown RBP4.84□□□□□ -1.63
HDAC1-205ENST00000472928 SNRPCP09234 159 aaKnown RBP4.84□□□□□ -1.63
HDAC1-205ENST00000472928 LGALS1P09382 135 aaKnown RBP4.84□□□□□ -1.63
HDAC1-205ENST00000472928 OR10J4P0C629 311 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 PYYP10082 97 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 GZMBP10144 247 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 GP9P14770 177 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 FABP4P15090 132 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 PSMB3P49720 205 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ERVFC1-1P60608 527 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ICAM4Q14773 271 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 COA6Q5JTJ3 125 aaKnown RBP4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF343Q6P1L6 599 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 TOMM20LQ6UXN7 152 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 S100A7AQ86SG5 101 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 MYOZ3Q8TDC0 251 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF414Q96IQ9 312 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 FAM167A-AS1Q96KT0 104 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BLQ99880 126 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 RARRES2Q99969 163 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 SHANK2-AS3Q9BTD1 123 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 PAXXQ9BUH6 204 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 C20orf24Q9BUV8 137 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 SLC25A39Q9BZJ4 359 aaPredicted RBP4.84□□□□□ -1.63
HDAC1-205ENST00000472928 TMEM167BQ9NRX6 74 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 RABAC1Q9UI14 185 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 VAX2Q9UIW0 290 aa4.84□□□□□ -1.63
HDAC1-205ENST00000472928 B4DEV8 164 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 NDUFA4O00483 81 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 PAGE4O60829 102 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 TAGLN2P37802 199 aaKnown RBP4.83□□□□□ -1.64
HDAC1-205ENST00000472928 MYCNOSP40205 109 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 CDKN1BP46527 198 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 ATP5G3P48201 142 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 CEBPGP53567 150 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 ELOBQ15370 118 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 SOHLH1Q5JUK2 328 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 CST9LP1Q5W188 147 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 Q6ZSN1 163 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM183AQ8IXX5 376 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 KLHL30-AS1Q8NEE0 82 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM190Q8WZ59 177 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF503Q96F45 646 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 METTL26Q96S19 204 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 ATG101Q9BSB4 218 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
HDAC1-205ENST00000472928 MRPL27Q9P0M9 148 aaKnown RBP4.83□□□□□ -1.64
HDAC1-205ENST00000472928 PEF1Q9UBV8 284 aaKnown RBP4.83□□□□□ -1.64
HDAC1-205ENST00000472928 YTHDF2Q9Y5A9 579 aaKnown RBP4.83□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 A0A087WW49 117 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 C11orf94C9JXX5 98 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 CIDEAO60543 219 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 HSPB1P04792 205 aaKnown RBP4.82□□□□□ -1.64
HDAC1-205ENST00000472928 TRGC1P0CF51 173 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 S100A7P31151 101 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 RBX1P62877 108 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 MEF2BQ02080 365 aaPredicted RBP4.82□□□□□ -1.64
HDAC1-205ENST00000472928 DEFB136Q30KP8 78 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 C1orf194Q5T5A4 169 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 UNQ9165/PRO28630Q6UXU0 137 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 BPIFA4PQ86YQ2 179 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 CYB561D1Q8N8Q1 229 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 BLNKQ8WV28 456 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 FXYD5Q96DB9 178 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 UBE2E2Q96LR5 201 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 DUX3Q96PT4 197 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
HDAC1-205ENST00000472928 TRBV24-1A0A075B6N3 115 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV3-66A0A0C4DH42 116 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF320A2RRD8 509 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 GGTLC3B5MD39 225 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 DIRC3C9JPN6 131 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 H3BTX0 84 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 K7EP13 123 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 TNFRSF6BO95407 300 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
HDAC1-205ENST00000472928 CXCL1P09341 107 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 NPSP0C0P6 89 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 RPL7P18124 248 aaKnown RBP4.81□□□□□ -1.64
HDAC1-205ENST00000472928 IQCJQ1A5X6 159 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM241Q24JQ0 296 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 GFI1BQ5VTD9 330 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 OR8I2Q8N0Y5 310 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 FRZBQ92765 325 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 FAM210BQ96KR6 192 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms