RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SEC11BP0C7V7 166 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 C4BPBP20851 252 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 PSG9Q00887 426 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 HIST1H1AQ02539 215 aaPredicted RBP6.66□□□□□ -1.34
SMC4-213ENST00000472282 KIR2DL5AQ8N109 375 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 EXOC3-AS1Q8N2X6 119 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 OR4B1Q8NGF8 309 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 KIR2DL5BQ8NHK3 375 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 TMED6Q8WW62 240 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 RPUSD4Q96CM3 377 aaKnown RBP6.66□□□□□ -1.34
SMC4-213ENST00000472282 CSTL1Q9H114 145 aa6.66□□□□□ -1.34
SMC4-213ENST00000472282 PRAC2D3DTV9 90 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 UBE2CO00762 179 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 SPRY2O43597 315 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 CXorf1O96002 111 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 GCHFRP30047 84 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 FHITP49789 147 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 CNN1P51911 297 aaKnown RBP6.65□□□□□ -1.34
SMC4-213ENST00000472282 PMS2P11Q13670 270 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 ICAM4Q14773 271 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 MORN3Q6PF18 240 aaPredicted RBP6.65□□□□□ -1.34
SMC4-213ENST00000472282 SLC51BQ86UW2 128 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 IQCF2Q8IXL9 164 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 OR8A1Q8NGG7 326 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 Q9H3A6 140 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.34
SMC4-213ENST00000472282 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 A8MTW9 85 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 UMAD1C9J7I0 102 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 DUSP14O95147 198 aaKnown RBP6.64□□□□□ -1.35
SMC4-213ENST00000472282 FGF8P55075 233 aaPredicted RBP6.64□□□□□ -1.35
SMC4-213ENST00000472282 FXYD7P58549 80 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 RANP62826 216 aaKnown RBP6.64□□□□□ -1.35
SMC4-213ENST00000472282 Q6ZWC4 215 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 FAM213BQ8TBF2 198 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 RNF183Q96D59 192 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 MRPL53Q96EL3 112 aaKnown RBP6.64□□□□□ -1.35
SMC4-213ENST00000472282 MAP1LC3BQ9GZQ8 125 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 SLC35B3Q9H1N7 401 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 PRELID1Q9Y255 219 aa6.64□□□□□ -1.35
SMC4-213ENST00000472282 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
SMC4-213ENST00000472282 NUTF2P61970 127 aaKnown RBP6.63□□□□□ -1.35
SMC4-213ENST00000472282 EIF5AL1Q6IS14 154 aaKnown RBP6.63□□□□□ -1.35
SMC4-213ENST00000472282 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 LYPD1Q8N2G4 141 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 OR10J6PQ8NGY7 276 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 TMEM167BQ9NRX6 74 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 XCL2Q9UBD3 114 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 TP53TG1Q9Y2A0 90 aa6.63□□□□□ -1.35
SMC4-213ENST00000472282 IGKV2-40A0A087WW87 121 aaPredicted RBP6.62□□□□□ -1.35
SMC4-213ENST00000472282 A0A1B0GV50 99 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 PGPA6NDG6 321 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 CXorf65A6NEN9 183 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 BOLA2-SMG1P6H3BVE0 249 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 M0R2Z0 102 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 IGKV2D-40P01614 121 aaPredicted RBP6.62□□□□□ -1.35
SMC4-213ENST00000472282 ERCC8Q13216 396 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 SPINK13Q1W4C9 94 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 FAM74A1Q5RGS3 127 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 DPPA3Q6W0C5 159 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 SUN5Q8TC36 379 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 LINC00476Q8WZB0 136 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 RPH3ALQ9UNE2 315 aa6.62□□□□□ -1.35
SMC4-213ENST00000472282 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 SLC25A5P05141 298 aaKnown RBP6.61□□□□□ -1.35
SMC4-213ENST00000472282 CSN1S1P47710 185 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 SULT1A2P50226 295 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 UBE2G2P60604 165 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 CMTM2Q8TAZ6 248 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
SMC4-213ENST00000472282 YTHDF2Q9Y5A9 579 aaKnown RBP6.61□□□□□ -1.35
SMC4-213ENST00000472282 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 DIRC3C9JPN6 131 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 INSP01308 110 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 AMBPP02760 352 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 CT45A10P0DMU9 189 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 RAB5CP51148 216 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 GNG5P63218 68 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
SMC4-213ENST00000472282 ALKAL2Q6UX46 152 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 OR11H2Q8NH07 326 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 VGLL1Q99990 258 aa6.6□□□□□ -1.35
SMC4-213ENST00000472282 IGHV3OR16-12A0A075B7B8 117 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 A0A1W2PRE2 83 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 RBAKDNA6NC62 111 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 J3KRW8 73 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 DEFB4AO15263 64 aa6.59□□□□□ -1.35
SMC4-213ENST00000472282 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.35
SMC4-213ENST00000472282 LY6G6CO95867 125 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms