RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 UQCC1Q9NVA1 299 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 PXMP4Q9Y6I8 212 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 RPL29P47914 159 aaKnown RBP5.57□□□□□ -1.52
USP48-207ENST00000471752 B2MP61769 119 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 BAXQ07812 192 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 ZNF846Q147U1 533 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 PXDC1Q5TGL8 231 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 TMEM256Q8N2U0 113 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 C15orf53Q8NAA6 179 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 OR10J6PQ8NGY7 276 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 TMEM263Q8WUH6 116 aaKnown RBP5.57□□□□□ -1.52
USP48-207ENST00000471752 ZNF503Q96F45 646 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 SLC50A1Q9BRV3 221 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 Q9H8V8 135 aa5.57□□□□□ -1.52
USP48-207ENST00000471752 FAM240BA0A1B0GVZ2 78 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 SCO2A0A1W2PP80 73 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 IGHV3-53P01767 116 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 CXCL2P19875 107 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 CLINT1Q14677 625 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 ICAM4Q14773 271 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 FAM122CQ6P4D5 195 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 ZNF493Q6ZR52 646 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 Q6ZRG5 221 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
USP48-207ENST00000471752 GNPNAT1Q96EK6 184 aaPredicted RBP5.56□□□□□ -1.52
USP48-207ENST00000471752 GPN1Q9HCN4 374 aaPredicted RBP5.56□□□□□ -1.52
USP48-207ENST00000471752 A0A096LPF7 62 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 KLLNB2CW77 178 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 OR10J4P0C629 311 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 S100A11P31949 105 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 H2BFSP57053 126 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 CNPY1Q3B7I2 92 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 LRRC37A5PQ49AS3 106 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 SPATA12Q7Z6I5 190 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 OR5C1Q8NGR4 320 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 Q8TAT8 98 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 CHAC2Q8WUX2 184 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 FXYD5Q96DB9 178 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 PHYHIPLQ96FC7 376 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 NPCDR1Q9BY65 106 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 WFDC1Q9HC57 220 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 TMEM14CQ9P0S9 112 aa5.55□□□□□ -1.52
USP48-207ENST00000471752 TRGV1A0A0A0MS02 117 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 C7orf71A4D174 169 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 C16orf90A8MZG2 172 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 RLN2P04090 185 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 HIST1H1EP10412 219 aaKnown RBP5.54□□□□□ -1.52
USP48-207ENST00000471752 M6PRP20645 277 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 S100A7P31151 101 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 LEPP41159 167 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 CCL18P55774 89 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 DAZ2Q13117 558 aaKnown RBP5.54□□□□□ -1.52
USP48-207ENST00000471752 ASAH1Q13510 395 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 CCDC28AQ8IWP9 274 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 OR1L4Q8NGR5 311 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 MRPL16Q9NX20 251 aaKnown RBP5.54□□□□□ -1.52
USP48-207ENST00000471752 MDFICQ9P1T7 246 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 TIMM9Q9Y5J7 89 aa5.54□□□□□ -1.52
USP48-207ENST00000471752 SNURFLB1AK76 121 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 SPINK4O60575 86 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 SLC25A5P05141 298 aaKnown RBP5.53□□□□□ -1.52
USP48-207ENST00000471752 NBEAP1P0C6P0 100 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 FAM3BP58499 235 aaPredicted RBP5.53□□□□□ -1.52
USP48-207ENST00000471752 RAB31Q13636 194 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 GUK1Q16774 197 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 MUC21Q5SSG8 566 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 Q6ZRN7 208 aaPredicted RBP5.53□□□□□ -1.52
USP48-207ENST00000471752 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 ODF3Q96PU9 254 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 C20orf144Q9BQM9 153 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 CCDC32Q9BV29 185 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 SMIM3Q9BZL3 60 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 FUT9Q9Y231 359 aa5.53□□□□□ -1.52
USP48-207ENST00000471752 TRGV2A0A075B6R0 118 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 A6NHS1 94 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 PRAF2O60831 178 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 ZNF253O75346 499 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 GPX1P07203 203 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 SFTA3P0C7M3 94 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 CRISP2P16562 243 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 PVALBP20472 110 aaPredicted RBP5.52□□□□□ -1.53
USP48-207ENST00000471752 RANP62826 216 aaKnown RBP5.52□□□□□ -1.53
USP48-207ENST00000471752 FHL2Q14192 279 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 ATP6V1FQ16864 119 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 SOHLH1Q5JUK2 328 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 S100A7AQ86SG5 101 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 STX12Q86Y82 276 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 EIF4E3Q8N5X7 224 aaKnown RBP5.52□□□□□ -1.53
USP48-207ENST00000471752 TVP23CQ96ET8 276 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 LINC00477Q96M19 166 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 PFDN5Q99471 154 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 PYGO2Q9BRQ0 406 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 PAXXQ9BUH6 204 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 WDR61Q9GZS3 305 aaKnown RBP5.52□□□□□ -1.53
USP48-207ENST00000471752 OR51M1Q9H341 326 aa5.52□□□□□ -1.53
USP48-207ENST00000471752 Q9H3A6 140 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms