RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NPIPB6E9PJ23 425 aa14.17□□□□□ -0.14
PSPC1-203ENST00000471658 RBMY1DP0C7P1 496 aaKnown RBP14.17□□□□□ -0.14
PSPC1-203ENST00000471658 CT45A10P0DMU9 189 aa14.17□□□□□ -0.14
PSPC1-203ENST00000471658 C9orf47Q6ZRZ4 202 aa14.17□□□□□ -0.14
PSPC1-203ENST00000471658 RBAKDNA6NC62 111 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 TMEM250H0YL14 139 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 RPL35P42766 123 aaKnown RBP14.16□□□□□ -0.14
PSPC1-203ENST00000471658 ZNF674Q2M3X9 581 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 KPRPQ5T749 579 aaPredicted RBP14.16□□□□□ -0.14
PSPC1-203ENST00000471658 PRNTQ86SH4 94 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 EIF4E3Q8N5X7 224 aaKnown RBP14.16□□□□□ -0.14
PSPC1-203ENST00000471658 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 ZMAT5Q9UDW3 170 aaKnown RBP14.16□□□□□ -0.14
PSPC1-203ENST00000471658 PSG8Q9UQ74 426 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 KLF12Q9Y4X4 402 aa14.16□□□□□ -0.14
PSPC1-203ENST00000471658 K7EQM0 130 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 STHQ8IWL8 128 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 TMEM75Q8N9X5 138 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 TVP23CQ96ET8 276 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 PARLQ9H300 379 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 SMDT1Q9H4I9 107 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 NOTCH1P46531 2555 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 SERTM2A0A1B0GWG4 89 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 DUSP14O95147 198 aaKnown RBP14.15□□□□□ -0.14
PSPC1-203ENST00000471658 FLI1Q01543 452 aaPredicted RBP14.15□□□□□ -0.14
PSPC1-203ENST00000471658 TMEM183BQ1AE95 376 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 TMEM78Q5T7P6 136 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 SRD5A3Q9H8P0 318 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 ZNF492Q9P255 531 aa14.15□□□□□ -0.14
PSPC1-203ENST00000471658 RPL35AP18077 110 aaKnown RBP14.14□□□□□ -0.15
PSPC1-203ENST00000471658 ZNF138P52744 262 aa14.14□□□□□ -0.15
PSPC1-203ENST00000471658 FXYD7P58549 80 aa14.14□□□□□ -0.15
PSPC1-203ENST00000471658 UBE2G1P62253 170 aa14.14□□□□□ -0.15
PSPC1-203ENST00000471658 UQCC3Q6UW78 93 aa14.14□□□□□ -0.15
PSPC1-203ENST00000471658 TRPT1Q86TN4 253 aaKnown RBP14.14□□□□□ -0.15
PSPC1-203ENST00000471658 LINC00477Q96M19 166 aa14.14□□□□□ -0.15
PSPC1-203ENST00000471658 TRBV20OR9-2A0A075B6H5 130 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 NDUFS6O75380 124 aaKnown RBP14.13□□□□□ -0.15
PSPC1-203ENST00000471658 SFTA3P0C7M3 94 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 AMTNQ6UX39 209 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 Q86TA4 180 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 FMC1Q96HJ9 113 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 AURKAIP1Q9NWT8 199 aaPredicted RBP14.13□□□□□ -0.15
PSPC1-203ENST00000471658 NBEAL1Q6ZS30 2694 aa14.13□□□□□ -0.15
PSPC1-203ENST00000471658 PGPEP1LA6NFU8 196 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 A8MTW9 85 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 KIR3DS1Q14943 382 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 NHLRC2Q8NBF2 726 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 J3KRW8 73 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 IGHV4-30-4P0DP06 118 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 FAM19A4Q96LR4 140 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 IGF2BP2-AS1Q96M15 143 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 C8orf49Q96NF6 230 aa14.12□□□□□ -0.15
PSPC1-203ENST00000471658 TMEM218A2RU14 115 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 M0R2Z0 102 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 TAS2R60P59551 318 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 CENPWQ5EE01 88 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 BAGE2Q86Y30 109 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 PPP1R14DQ9NXH3 145 aa14.11□□□□□ -0.15
PSPC1-203ENST00000471658 TRBV6-1A0A0K0K1D8 114 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 ZNF727A8MUV8 499 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 LTAP01374 205 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 SPINK13Q1W4C9 94 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 SOHLH1Q5JUK2 328 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 SMIM7Q9BQ49 75 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 TUBA4BQ9H853 241 aa14.1□□□□□ -0.15
PSPC1-203ENST00000471658 S100A9P06702 114 aaKnown RBP14.09□□□□□ -0.15
PSPC1-203ENST00000471658 ADCYAP1P18509 176 aa14.09□□□□□ -0.15
PSPC1-203ENST00000471658 NDUFA5Q16718 116 aa14.09□□□□□ -0.15
PSPC1-203ENST00000471658 PRR9Q5T870 116 aa14.09□□□□□ -0.15
PSPC1-203ENST00000471658 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.15
PSPC1-203ENST00000471658 K7EIL1 84 aa14.08□□□□□ -0.15
PSPC1-203ENST00000471658 IGLV2-8P01709 118 aa14.08□□□□□ -0.15
PSPC1-203ENST00000471658 ZFAND2AQ8N6M9 145 aa14.08□□□□□ -0.15
PSPC1-203ENST00000471658 CLUHP3Q96NS8 147 aa14.08□□□□□ -0.15
PSPC1-203ENST00000471658 FBLL1A6NHQ2 334 aaKnown RBP14.08□□□□□ -0.16
PSPC1-203ENST00000471658 GNG4P50150 75 aa14.08□□□□□ -0.16
PSPC1-203ENST00000471658 Q6ZQT7 251 aa14.08□□□□□ -0.16
PSPC1-203ENST00000471658 ZFP30Q9Y2G7 519 aa14.08□□□□□ -0.16
PSPC1-203ENST00000471658 GIG44P09565 113 aaPredicted RBP14.07□□□□□ -0.16
PSPC1-203ENST00000471658 OCC1Q8TAD7 63 aa14.07□□□□□ -0.16
PSPC1-203ENST00000471658 MLST8Q9BVC4 326 aa14.07□□□□□ -0.16
PSPC1-203ENST00000471658 LOC102724200A0A096LPH7 203 aaPredicted RBP14.06□□□□□ -0.16
PSPC1-203ENST00000471658 CRISP2P16562 243 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 ZNF80P51504 273 aaPredicted RBP14.06□□□□□ -0.16
PSPC1-203ENST00000471658 BTN1A1Q13410 526 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 SAPCD1Q5SSQ6 148 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 TMEM183AQ8IXX5 376 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 ZC2HC1AQ96GY0 325 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 ODF3Q96PU9 254 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 NDFIP1Q9BT67 221 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 XCL2Q9UBD3 114 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 LENEPQ9Y5L5 61 aa14.06□□□□□ -0.16
PSPC1-203ENST00000471658 C9JCJ5 164 aa14.05□□□□□ -0.16
PSPC1-203ENST00000471658 F8W036 122 aa14.05□□□□□ -0.16
PSPC1-203ENST00000471658 CRXO43186 299 aaPredicted RBP14.05□□□□□ -0.16
PSPC1-203ENST00000471658 RNASE4P34096 147 aaKnown RBP14.05□□□□□ -0.16
PSPC1-203ENST00000471658 LEPP41159 167 aa14.05□□□□□ -0.16
PSPC1-203ENST00000471658 CDKN1BP46527 198 aa14.05□□□□□ -0.16
PSPC1-203ENST00000471658 LINC00322Q6ZN03 302 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms