RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.11
COL20A1-205ENST00000471582 URB1-AS1Q96HZ7 61 aa14.33□□□□□ -0.11
COL20A1-205ENST00000471582 RAB4AP20338 218 aa14.33□□□□□ -0.12
COL20A1-205ENST00000471582 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
COL20A1-205ENST00000471582 IGFL4Q6B9Z1 124 aa14.33□□□□□ -0.12
COL20A1-205ENST00000471582 LINC01356Q8N9X3 169 aa14.33□□□□□ -0.12
COL20A1-205ENST00000471582 FAM181BA6NEQ2 426 aa14.32□□□□□ -0.12
COL20A1-205ENST00000471582 LRRC75A-AS1Q8N1F1 130 aa14.32□□□□□ -0.12
COL20A1-205ENST00000471582 Q8TAT8 98 aa14.32□□□□□ -0.12
COL20A1-205ENST00000471582 USMG5Q96IX5 58 aa14.32□□□□□ -0.12
COL20A1-205ENST00000471582 PPIFP30405 207 aaKnown RBP14.31□□□□□ -0.12
COL20A1-205ENST00000471582 CLEC5AQ9NY25 188 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 ARL3P36405 182 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 LY6EQ16553 131 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 DEFB113Q30KQ7 82 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 TDRG1Q3Y452 100 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 LINC00527Q9UJ94 153 aa14.31□□□□□ -0.12
COL20A1-205ENST00000471582 CTRLP40313 264 aa14.3□□□□□ -0.12
COL20A1-205ENST00000471582 PRR31Q5SQ13 230 aa14.3□□□□□ -0.12
COL20A1-205ENST00000471582 LYZL1Q6UWQ5 148 aa14.3□□□□□ -0.12
COL20A1-205ENST00000471582 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-205ENST00000471582 TPPP3Q9BW30 176 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 PAM16Q9Y3D7 125 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 POLQO75417 2590 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 TRAV8-2A0A0B4J237 113 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 IGHV3-66A0A0C4DH42 116 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 NDUFA4O00483 81 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 LINC00614P0C842 121 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 C8orf86Q6ZUL3 223 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 ZNF580Q9UK33 172 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 ABCA12Q86UK0 2595 aa14.29□□□□□ -0.12
COL20A1-205ENST00000471582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL20A1-205ENST00000471582 A0A096LNT2 108 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 PRAC2D3DTV9 90 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 J3QLI3 93 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 BTF3P20290 206 aaKnown RBP14.28□□□□□ -0.12
COL20A1-205ENST00000471582 LOXL1Q08397 574 aaPredicted RBP14.28□□□□□ -0.12
COL20A1-205ENST00000471582 PMCHL1Q16048 86 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 RNF182Q8N6D2 247 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 GLMPQ8WWB7 406 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 MIEN1Q9BRT3 115 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 C2orf88Q9BSF0 95 aa14.28□□□□□ -0.12
COL20A1-205ENST00000471582 TMSB15BA0A087X1C1 80 aa14.27□□□□□ -0.12
COL20A1-205ENST00000471582 C2orf70A6NJV1 201 aa14.27□□□□□ -0.12
COL20A1-205ENST00000471582 FABP5P3A8MUU1 101 aa14.27□□□□□ -0.12
COL20A1-205ENST00000471582 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.12
COL20A1-205ENST00000471582 IGLC6P0CF74 106 aa14.27□□□□□ -0.12
COL20A1-205ENST00000471582 EBLN2Q6P2I7 272 aa14.27□□□□□ -0.12
COL20A1-205ENST00000471582 IGHV3OR16-13A0A075B7E8 117 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 IGHV3-74A0A0B4J1X5 117 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 IGHV1-24A0A0C4DH33 117 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 AVPP01185 164 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 OR5AL1P0C617 328 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 MRPL52Q86TS9 123 aaKnown RBP14.27□□□□□ -0.13
COL20A1-205ENST00000471582 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.13
COL20A1-205ENST00000471582 ERCC8Q13216 396 aa14.26□□□□□ -0.13
COL20A1-205ENST00000471582 FER1L6-AS1Q8NA97 138 aa14.26□□□□□ -0.13
COL20A1-205ENST00000471582 PPP1R14DQ9NXH3 145 aa14.26□□□□□ -0.13
COL20A1-205ENST00000471582 IGHV3-49A0A0A0MS15 119 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 M0QZ24 198 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 IGLV1-40P01703 118 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 LINC01559Q495D7 138 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 C9orf139Q6ZV77 190 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 CNFNQ9BYD5 112 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 APCP25054 2843 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 A0A0G2JLM5 398 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 CRXO43186 299 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-205ENST00000471582 TGFAP01135 160 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 BLCAPP62952 87 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 Q5PR19 223 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 FAM104BQ5XKR9 115 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 C9orf47Q6ZRZ4 202 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 TMEM70Q9BUB7 260 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 U3KQK5 164 aa14.25□□□□□ -0.13
COL20A1-205ENST00000471582 RNF223E7ERA6 249 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 ZNF138P52744 262 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 TMEM78Q5T7P6 136 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 IL17RELQ6ZVW7 336 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 ZNF575Q86XF7 245 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 AGPAT4-IT1Q9H0P7 198 aa14.24□□□□□ -0.13
COL20A1-205ENST00000471582 TMEM213A2RRL7 107 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 TRBV12-3P01733 135 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 HIST1H1AQ02539 215 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-205ENST00000471582 CFHR3Q02985 330 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 LEPROTL1O95214 131 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 ORM1P02763 201 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 PF4V1P10720 104 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 SPATA45Q537H7 98 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 PRSS57Q6UWY2 283 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 UNQ9165/PRO28630Q6UXU0 137 aa14.23□□□□□ -0.13
COL20A1-205ENST00000471582 C16orf92Q96LL3 132 aa14.22□□□□□ -0.13
COL20A1-205ENST00000471582 KLK15Q9H2R5 256 aa14.22□□□□□ -0.13
COL20A1-205ENST00000471582 MAP1AP78559 2803 aaPredicted RBP14.22□□□□□ -0.13
COL20A1-205ENST00000471582 M0R143 59 aa14.21□□□□□ -0.13
COL20A1-205ENST00000471582 MAPK1IP1LQ8NDC0 245 aa14.21□□□□□ -0.13
COL20A1-205ENST00000471582 OR4X2Q8NGF9 303 aa14.21□□□□□ -0.13
COL20A1-205ENST00000471582 AP5S1Q9NUS5 200 aa14.21□□□□□ -0.13
COL20A1-205ENST00000471582 LENEPQ9Y5L5 61 aa14.21□□□□□ -0.13
COL20A1-205ENST00000471582 C20orf202A1L168 122 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms