RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 HBE1P02100 147 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 TPT1P13693 172 aaKnown RBP12.77□□□□□ -0.37
VPS72-204ENST00000471423 FHITP49789 147 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 LINC00477Q96M19 166 aa12.77□□□□□ -0.37
VPS72-204ENST00000471423 MAP1LC3B2A6NCE7 125 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 FGF8P55075 233 aaPredicted RBP12.76□□□□□ -0.37
VPS72-204ENST00000471423 Q8TAT8 98 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 C11orf45Q8TAV5 145 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 TMED6Q8WW62 240 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 MAP1LC3BQ9GZQ8 125 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 TMPRSS5Q9H3S3 457 aa12.76□□□□□ -0.37
VPS72-204ENST00000471423 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 CXorf65A6NEN9 183 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
VPS72-204ENST00000471423 GNG5P63218 68 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 ZFP69Q49AA0 526 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
VPS72-204ENST00000471423 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
VPS72-204ENST00000471423 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
VPS72-204ENST00000471423 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
VPS72-204ENST00000471423 UMAD1C9J7I0 102 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 PRM2P04554 102 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
VPS72-204ENST00000471423 ZNF138P52744 262 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 EMP1P54849 157 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 FAM213BQ8TBF2 198 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 LINC01587Q99440 93 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 ZNF492Q9P255 531 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
VPS72-204ENST00000471423 PLECQ15149 4684 aaKnown RBP12.73□□□□□ -0.37
VPS72-204ENST00000471423 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
VPS72-204ENST00000471423 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
VPS72-204ENST00000471423 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
VPS72-204ENST00000471423 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
VPS72-204ENST00000471423 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 C7orf71A4D174 169 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 KLLNB2CW77 178 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 H7BYZ3 331 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 HTN1P15515 57 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 CRISP2P16562 243 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 UBE2G2P60604 165 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 ZFAND2AQ8N6M9 145 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 ARL6IP6Q8N6S5 226 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
VPS72-204ENST00000471423 YTHDF2Q9Y5A9 579 aaKnown RBP12.72□□□□□ -0.37
VPS72-204ENST00000471423 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 GPX1P07203 203 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
VPS72-204ENST00000471423 TAS2R60P59551 318 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
VPS72-204ENST00000471423 PRR9Q5T870 116 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 DPPA3Q6W0C5 159 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 SLC51BQ86UW2 128 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
VPS72-204ENST00000471423 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
VPS72-204ENST00000471423 NMBP08949 121 aa12.7□□□□□ -0.38
VPS72-204ENST00000471423 AZU1P20160 251 aa12.7□□□□□ -0.38
VPS72-204ENST00000471423 ZNF767PQ75MW2 155 aa12.7□□□□□ -0.38
VPS72-204ENST00000471423 SFT2D1Q8WV19 159 aa12.7□□□□□ -0.38
VPS72-204ENST00000471423 A0A1B0GV50 99 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 TCRAP04437 139 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
VPS72-204ENST00000471423 EIF5AL1Q6IS14 154 aaKnown RBP12.69□□□□□ -0.38
VPS72-204ENST00000471423 PHLDA1Q8WV24 401 aaPredicted RBP12.69□□□□□ -0.38
VPS72-204ENST00000471423 MBD3L1Q8WWY6 194 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
VPS72-204ENST00000471423 TRBV7-9A0A0J9YWB2 115 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 SERTM2A0A1B0GWG4 89 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 SPART-AS1P0CW21 52 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 Q6ZTC4 211 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 DKK2Q9UBU2 259 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
VPS72-204ENST00000471423 SACSQ9NZJ4 4579 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
VPS72-204ENST00000471423 IFNA7P01567 189 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 H2AFB1P0C5Y9 115 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
VPS72-204ENST00000471423 CYB561D1Q8N8Q1 229 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
VPS72-204ENST00000471423 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
VPS72-204ENST00000471423 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms