RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FGF6P10767 208 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 RPS4Y1P22090 263 aaKnown RBP-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 FKBP2P26885 142 aaKnown RBP-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 DDTP30046 118 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 GLRXP35754 106 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CD151P48509 253 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CCL18P55774 89 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CLDN12P56749 244 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CCL7P80098 99 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 TNFAIP6P98066 277 aaPredicted RBP-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 PDE6HQ13956 83 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 KISS1Q15726 138 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 C1orf194Q5T5A4 169 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CLEC6AQ6EIG7 209 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 Q6ZQT0 140 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 ZNF826PQ6ZT77 177 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 OR52L1Q8NGH7 329 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 WFDC5Q8TCV5 224 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 MT1LQ93083 61 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 KIFC1Q9BW19 673 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 BPESC1Q9GZL8 116 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 MS4A6AQ9H2W1 248 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 WDR54Q9H977 334 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 CBLN4Q9NTU7 201 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 PAQR5Q9NXK6 330 aaPredicted RBP-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 AK3Q9UIJ7 227 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 ANAPC10Q9UM13 185 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 MYH3P11055 1940 aa-0.15□□□□□ -2.43
UBXN4-207ENST00000471246 PPLO60437 1756 aa-0.16□□□□□ -2.43
UBXN4-207ENST00000471246 DEFB131BA0A096LNP1 70 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 IGHV1-69-2A0A0G2JMI3 117 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 FABP5P3A8MUU1 101 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 H0Y980 276 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 KCNK1O00180 336 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 CCL16O15467 120 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 NOS1APO75052 506 aaPredicted RBP-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 CST7O76096 145 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 CTSDP07339 412 aaPredicted RBP-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 IVLP07476 585 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 HTR1AP08908 422 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 SRP19P09132 144 aaKnown RBP-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 RD3LP0DJH9 198 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 MAP2K4P45985 399 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 UBE2D1P51668 147 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 SPINK7P58062 85 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB112Q30KQ8 113 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 SPINK9Q5DT21 86 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 FAM78BQ5VT40 261 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 SYPL2Q5VXT5 272 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 DNM1P34Q6PK57 102 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 CD200R1LQ6Q8B3 271 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 FOXI2Q6ZQN5 318 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 PLEKHG7Q6ZR37 379 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 HIST2H3AQ71DI3 136 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 UBL4BQ8N7F7 174 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 OR11H6Q8NGC7 330 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 OR4D11Q8NGI4 311 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 CT55Q8WUE5 264 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 NAT14Q8WUY8 206 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 DIRC1Q969H9 104 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 ULBP3Q9BZM4 244 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 DERL2Q9GZP9 239 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 C11orf68Q9H3H3 251 aaKnown RBP-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 AGPAT3Q9NRZ7 376 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 FUT9Q9Y231 359 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 PXMP4Q9Y6I8 212 aa-0.16□□□□□ -2.44
UBXN4-207ENST00000471246 TRAV5A0A0B4J249 113 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 LOC100506127A0A0U1RQW1 187 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 FAM236DA0A1B0GTK5 79 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CXorf51AA0A1B0GTR3 108 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 TINCRA0A1B0GVN0 87 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 ARL5CA6NH57 179 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 EEF1E1-BLOC1S5C9J1V9 151 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 FTCDNL1E5RQL4 147 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 F8VZ95 297 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 H3BSH0 61 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 PITX3O75364 302 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 LYPLA2O95372 231 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 KRT75O95678 551 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 HAND1O96004 215 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 ORM1P02763 201 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 PRM2P04554 102 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 IL3P08700 152 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 FAM236CP0DP71 79 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 SPI1P17947 270 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CCL1P22362 96 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CD52P31358 61 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 RPS20P60866 119 aaKnown RBP-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CXCR4P61073 352 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 STX5Q13190 355 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 Q3ZCU0 254 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 SCIMPQ6UWF3 145 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 C5orf46Q6UWT4 87 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 PHF5AQ7RTV0 110 aaKnown RBP-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 GKN2Q86XP6 184 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CRLF3Q8IUI8 442 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 BOD1L2Q8IYS8 172 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 JOSD2Q8TAC2 188 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 Q8TAT8 98 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 PSMF1Q92530 271 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms