RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
PTPRE-207ENST00000471218 PYGO2Q9BRQ0 406 aa6.92□□□□□ -1.3
PTPRE-207ENST00000471218 COLCA2A8K830 154 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 K7EN84 100 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 APOHP02749 345 aaPredicted RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 PF4P02776 101 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 TYMSP04818 313 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 CT45A10P0DMU9 189 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 CBLN1P23435 193 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 SYNJ2BPP57105 145 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 SNRPD3P62318 126 aaKnown RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 GNG5P63218 68 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 Q6AWC8 147 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 TMEM88Q6PEY1 159 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 OR11H1Q8NG94 326 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 ODF3Q96PU9 254 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
PTPRE-207ENST00000471218 GFRA4Q9GZZ7 299 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 PSG8Q9UQ74 426 aa6.91□□□□□ -1.3
PTPRE-207ENST00000471218 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 TRAV8-2A0A0B4J237 113 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 XKRY2A2RUG3 117 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 ZNF207O43670 478 aaKnown RBP6.9□□□□□ -1.3
PTPRE-207ENST00000471218 CD28P10747 220 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 ELOBQ15370 118 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 TMEM78Q5T7P6 136 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 RASL11AQ6T310 242 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 TCF24Q7RTU0 167 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 OR2K2Q8NGT1 345 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 LINC00477Q96M19 166 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
PTPRE-207ENST00000471218 IL36BQ9NZH7 164 aa6.9□□□□□ -1.3
PTPRE-207ENST00000471218 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
PTPRE-207ENST00000471218 A8MWL6 223 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 H3BTX0 84 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 M0R3E3 92 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 CCL24O00175 119 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 CXCL1P09341 107 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 RAB5AP20339 215 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
PTPRE-207ENST00000471218 GBGT1Q8N5D6 347 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 OR10J6PQ8NGY7 276 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
PTPRE-207ENST00000471218 LINC00479Q96M42 142 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 PRR25Q96S07 402 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 SPAG8Q99932 426 aaPredicted RBP6.89□□□□□ -1.31
PTPRE-207ENST00000471218 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 V9GYV3 84 aa6.89□□□□□ -1.31
PTPRE-207ENST00000471218 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 K7EQG2 157 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 P01737 135 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 MGST1P10620 155 aaKnown RBP6.88□□□□□ -1.31
PTPRE-207ENST00000471218 IGLL1P15814 213 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 ZNF138P52744 262 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
PTPRE-207ENST00000471218 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
PTPRE-207ENST00000471218 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 FAM162BQ5T6X4 162 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 ATP5L2Q7Z4Y8 100 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 FAM24BQ8N5W8 94 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 TSKUQ8WUA8 353 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 ASCL2Q99929 193 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
PTPRE-207ENST00000471218 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
PTPRE-207ENST00000471218 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 A0A1B0GW15 77 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 PGPEP1LA6NFU8 196 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 GATCO43716 136 aaKnown RBP6.87□□□□□ -1.31
PTPRE-207ENST00000471218 MT-ND6P03923 174 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 CSN3P07498 182 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 CRISP2P16562 243 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 FOXA3P55318 350 aaPredicted RBP6.87□□□□□ -1.31
PTPRE-207ENST00000471218 RPL11P62913 178 aaKnown RBP6.87□□□□□ -1.31
PTPRE-207ENST00000471218 HIST1H1AQ02539 215 aaPredicted RBP6.87□□□□□ -1.31
PTPRE-207ENST00000471218 EGFEM1PQ0D2K5 195 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 PRNTQ86SH4 94 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 APRG1Q8IVJ8 170 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 MS4A6AQ9H2W1 248 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 RPH3ALQ9UNE2 315 aa6.87□□□□□ -1.31
PTPRE-207ENST00000471218 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms